DRSC/TRiP Functional Genomics Resources

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Protein Alignment scpr-A and crispld1

DIOPT Version :10

Sequence 1:NP_650062.1 Gene:scpr-A / 41358 FlyBaseID:FBgn0037889 Length:264 Species:Drosophila melanogaster
Sequence 2:XP_002937123.2 Gene:crispld1 / 100490431 XenbaseID:XB-GENE-989389 Length:514 Species:Xenopus tropicalis


Alignment Length:214 Identity:55/214 - (25%)
Similarity:74/214 - (34%) Gaps:53/214 - (24%)


- Green bases have known domain annotations that are detailed below.


  Fly    56 EPHHKLILNLFNELRNNVAGGKIEGLPKAVRMAKMSWCEELSHLALLNVKTC--ESLPDKCRSTE 118
            |...||||:|.|:||..|       .|.|..|..|.|..||...|....:||  |..|     .:
 Frog    59 ESDMKLILDLHNKLRGEV-------YPPASNMEFMIWDVELERSAEAWAETCLWEHGP-----AD 111

  Fly   119 RFAYAGQNNALFQYSGAETEYTDAEIIKEEIENWFAE-RSNASPEILASFPEE--------LPNK 174
            .....|||  |..:.|.....|      ..::.|:.| |....|     :|:|        ....
 Frog   112 LLPVIGQN--LGAHWGRYRPPT------YHVQAWYDEVRDYTFP-----YPQECDPYCPFRCSGP 163

  Fly   175 AVTKFTIAVAEKNTHVGCA----------AVRFSRDFYNHFVLTCNFA-TSNIVGQPVYTPGEKA 228
            ..|.:|..|...::.:|||          ...:.:..|    |.||:: ..|..|...|..|...
 Frog   164 VCTHYTQLVWATSSRIGCAINLCHNMNVWGQIWPKAIY----LVCNYSPKGNWWGHAPYKHGHPC 224

  Fly   229 TTGCKNRYGAAYDYPNLCY 247
             :.|...||.... .||||
 Frog   225 -SACPPSYGGGCK-DNLCY 241

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
scpr-ANP_650062.1 CAP_euk 59..212 CDD:349399 43/173 (25%)
crispld1XP_002937123.2 CAP_CRISPLD1 62..207 CDD:349407 43/173 (25%)
LCCL 304..388 CDD:128866
LCCL 407..505 CDD:427521
Blue background indicates that the domain is not in the aligned region.

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