DRSC/TRiP Functional Genomics Resources

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Protein Alignment scpr-B and AT1G50060

DIOPT Version :9

Sequence 1:NP_650061.1 Gene:scpr-B / 41357 FlyBaseID:FBgn0037888 Length:262 Species:Drosophila melanogaster
Sequence 2:NP_175428.1 Gene:AT1G50060 / 841430 AraportID:AT1G50060 Length:161 Species:Arabidopsis thaliana


Alignment Length:183 Identity:40/183 - (21%)
Similarity:67/183 - (36%) Gaps:47/183 - (25%)


- Green bases have known domain annotations that are detailed below.


  Fly    41 SENCPKDVREVKIEPHHKLILNLFNELRNNVAGGKIEGLPKAVRMAKMSWCEELSHLAL--LNVK 103
            ::|.|:|            .||..|..|..|      |:|..|      |...|:..||  .|.:
plant    23 AQNTPQD------------YLNSHNTARAQV------GVPNVV------WDTTLAAYALNYSNFR 63

  Fly   104 TCESLPDKCRSTERFAYAGQNNALFQYSGAETEYTDAEIIKEQIENWFAERSNASPEILASFPEE 168
            ..:     |.........|:|.|    .|:.:.::....:|    .|..|:    |....::...
plant    64 KAD-----CNLVHSNGPYGENLA----KGSSSSFSAISAVK----LWVDEK----PYYSYAYNNC 111

  Fly   169 LPNKAVTKFTIAVAEKNTHVGCAAVRFSRDFYNHFVLTCNF-ATSNIVGQPVY 220
            ...|....:|..|...:..:|||.|:.:..::  || :||: :..|.||:..|
plant   112 TGGKQCLHYTQVVWRDSVKIGCARVQCTNTWW--FV-SCNYNSPGNWVGEYPY 161

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
scpr-BNP_650061.1 SCP_euk 58..210 CDD:240180 33/154 (21%)
AT1G50060NP_175428.1 CAP_PR-1 27..161 CDD:349400 38/177 (21%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG2340
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1528782at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.910

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