DRSC/TRiP Functional Genomics Resources

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Protein Alignment scpr-B and AT1G50050

DIOPT Version :10

Sequence 1:NP_650061.1 Gene:scpr-B / 41357 FlyBaseID:FBgn0037888 Length:262 Species:Drosophila melanogaster
Sequence 2:NP_175427.1 Gene:AT1G50050 / 841429 AraportID:AT1G50050 Length:226 Species:Arabidopsis thaliana


Alignment Length:157 Identity:35/157 - (22%)
Similarity:53/157 - (33%) Gaps:54/157 - (34%)


- Green bases have known domain annotations that are detailed below.


  Fly   121 AGQNNALFQYSGAETEYTDAEIIKEQIENWFAER------SNASPEILASFPEELPNKAVTKFTI 179
            |..|||||....|             :..|..|:      :||.          :..:....:|.
plant    82 ANGNNALFTGVAA-------------VNLWVNEKPYYNYTANAC----------IGAQQCKHYTQ 123

  Fly   180 AVAEKNTHVGCAAVRFSRDFYNHFVLTCNFATS------NIVGQPVYTPGEKATTGC---KNRYG 235
            .|...:..:|||.|..:...|  || .||:..|      .|......|.|..|:..|   :|::.
plant   124 VVWSNSVKIGCARVLCNNGGY--FV-GCNYDASAALKSRKITASVRQTRGLGASAACGQLRNKFQ 185

  Fly   236 AAYDYPNLCYAK----------EIYDN 252
            .:   |:|..|:          |.:||
plant   186 KS---PSLATAEGEVIEARLRSEDFDN 209

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
scpr-BNP_650061.1 CAP_euk 57..210 CDD:349399 22/94 (23%)
AT1G50050NP_175427.1 CAP_PR-1 27..151 CDD:349400 22/94 (23%)
RlmN <156..183 CDD:440582 5/26 (19%)

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