DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment scpr-B and AT1G01310

DIOPT Version :10

Sequence 1:NP_650061.1 Gene:scpr-B / 41357 FlyBaseID:FBgn0037888 Length:262 Species:Drosophila melanogaster
Sequence 2:NP_171638.2 Gene:AT1G01310 / 839333 AraportID:AT1G01310 Length:241 Species:Arabidopsis thaliana


Alignment Length:144 Identity:32/144 - (22%)
Similarity:49/144 - (34%) Gaps:44/144 - (30%)


- Green bases have known domain annotations that are detailed below.


  Fly   128 FQYSGAETEYT---------DAEIIKEQ---IENWF-AERSNASP-EILASFPEE---------- 168
            ||:.|....|.         |..::...   .||.| |.::|.|| :|:..:.:|          
plant   104 FQWDGRLAAYARTWANQRVGDCRLVHSNGPYGENIFWAGKNNWSPRDIVNVWADEDKFYDVKGNT 168

  Fly   169 -LPNKAVTKFTIAVAEKNTHVGCAAVRFSRDFYNHFVLTCNFATSNIVGQPVYTP-----GEKAT 227
             .|......:|..|...:|.||||:|              :.:...:....||.|     ||...
plant   169 CEPQHMCGHYTQIVWRDSTKVGCASV--------------DCSNGGVYAICVYNPPGNYEGENPF 219

  Fly   228 TGCKNRYGAAYDYP 241
            ....::.|.|.|.|
plant   220 GSYDDQIGLARDDP 233

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
scpr-BNP_650061.1 CAP_euk 57..210 CDD:349399 23/106 (22%)
AT1G01310NP_171638.2 CAP_PR-1 87..219 CDD:349400 28/128 (22%)

Return to query results.
Submit another query.