DRSC/TRiP Functional Genomics Resources

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Protein Alignment scpr-B and Crispld1

DIOPT Version :9

Sequence 1:NP_650061.1 Gene:scpr-B / 41357 FlyBaseID:FBgn0037888 Length:262 Species:Drosophila melanogaster
Sequence 2:NP_001343480.1 Gene:Crispld1 / 83691 MGIID:1934666 Length:500 Species:Mus musculus


Alignment Length:281 Identity:64/281 - (22%)
Similarity:104/281 - (37%) Gaps:55/281 - (19%)


- Green bases have known domain annotations that are detailed below.


  Fly     9 LTSLLGISLAADYCALP--TCLDKHIA--CNNKGNFSENCPKDVREVKIEPHHKLILNLFNELRN 69
            :|:||.::.|.....:|  |.|:|.:.  .:..|.:.....:..|.: .:...:.||:|.|:||:
Mouse    11 VTALLFVARAVPAMVVPNATLLEKLLEKYMDEDGEWWTAKQRGKRAI-TDNDMQSILDLHNKLRS 74

  Fly    70 NVAGGKIEGLPKAVRMAKMSWCEELSHLALLNVKTCESLPDKC----RSTERFAYAGQNNALFQY 130
            .|       .|.|..|..|:|..||.       ::.||..:.|    .........|||  |..:
Mouse    75 QV-------YPTASNMEYMTWDVELE-------RSAESWAEMCLWEHGPASLLPSIGQN--LGAH 123

  Fly   131 SGAETEYTDAEIIKEQIENWFAE-RSNASP---EILASFPEELPNKAVTKFTIAVAEKNTHVGCA 191
            .|.....|      ..::.|:.| |..:.|   |.....|........|.:|..|...::.:|||
Mouse   124 WGRYRPPT------FHVQAWYDEVRDFSYPYENECDPYCPFRCSGPVCTHYTQVVWATSSRIGCA 182

  Fly   192 A-VRFSRDFYNHF-----VLTCNFA-TSNIVGQPVYTPGEKATTGCKNRYGAAYDYPNLCY---- 245
            . :..:.:.:...     .|.||:: ..|..|...|..| :..:.|...:|... ..||||    
Mouse   183 VNLCHNMNIWGQIWPKAVYLVCNYSPKGNWWGHAPYKHG-RPCSACPPSFGGGC-RENLCYKEGS 245

  Fly   246 -----AKEIYDNEKVIENTQT 261
                 .:|...||  ||..|:
Mouse   246 DRYYTPREEETNE--IERQQS 264

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
scpr-BNP_650061.1 SCP_euk 58..210 CDD:240180 38/165 (23%)
Crispld1NP_001343480.1 CAP_CRISPLD1 62..207 CDD:349407 38/166 (23%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 258..281 4/9 (44%)
LCCL 291..375 CDD:128866
LCCL 394..492 CDD:367672
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C167841231
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG2340
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1528782at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR10334
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
54.850

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