DRSC/TRiP Functional Genomics Resources

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Protein Alignment scpr-B and AT4G25790

DIOPT Version :9

Sequence 1:NP_650061.1 Gene:scpr-B / 41357 FlyBaseID:FBgn0037888 Length:262 Species:Drosophila melanogaster
Sequence 2:NP_194309.1 Gene:AT4G25790 / 828684 AraportID:AT4G25790 Length:210 Species:Arabidopsis thaliana


Alignment Length:179 Identity:41/179 - (22%)
Similarity:60/179 - (33%) Gaps:58/179 - (32%)


- Green bases have known domain annotations that are detailed below.


  Fly    53 IEPHHKLILNLFNELRNNVAGGKIEGLPKAVRMAKMS-----WCEELSHLALLNVKTCESLPDKC 112
            ::||            |.|.||.  |||..|...|::     |..:..:              .|
plant    79 LDPH------------NTVRGGL--GLPPLVWDVKIASYATWWANQRRY--------------DC 115

  Fly   113 RSTERFAYAGQNNALFQYSGAETEYTDAEIIKEQIENWFAERSNASPEILASFPEELPNKA---- 173
            ..|......|:|  ||..||::...|.|      :|:|..|         |.....:.|..    
plant   116 SLTHSTGPYGEN--LFWGSGSDFTSTFA------VESWTVE---------AKSYNHMTNTCEGDG 163

  Fly   174 -VTKFTIAVAEKNTHVGCAAVRFSRDFYNHFVLTCNF-ATSNIVGQPVY 220
             ...:|..|..:...:|||.| ...:....|: |||: ...|.||:..|
plant   164 MCGHYTQIVWRETRRLGCARV-VCENGAGVFI-TCNYDPPGNYVGEKPY 210

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
scpr-BNP_650061.1 SCP_euk 58..210 CDD:240180 35/162 (22%)
AT4G25790NP_194309.1 CAP_PR-1 76..210 CDD:349400 40/177 (23%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG2340
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1528782at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.910

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