DRSC - DRSC Integrative Ortholog Prediction Tool

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits

Protein Alignment scpr-B and PR-1-LIKE

DIOPT Version :9

Sequence 1:	NP_650061.1	Gene:	scpr-B / 41357	FlyBaseID:	FBgn0037888	Length:	262	Species:	Drosophila melanogaster
Sequence 2:	NP_179589.1	Gene:	PR-1-LIKE / 816518	AraportID:	AT2G19990	Length:	176	Species:	Arabidopsis thaliana

Alignment Length:	180	Identity:	41/180 - (22%)
Similarity:	61/180 - (33%)	Gaps:	39/180 - (21%)

- Green bases have known domain annotations that are detailed below.

  Fly    45 PKDVREVKIEPHHKLILNLFNELRNNVAGGKIEGLPKAVRMAKMSWCEELSHLALLNVKTCESLP 109
            ||......::|...|:::  |:.|..|..|            .|.|.|.|:..|  .....|...
plant    32 PKANANGDVKPQETLVVH--NKARAMVGVG------------PMVWNETLATYA--QSYAHERAR 80

  Fly   110 DKCRSTERFAYAGQNNAL--FQYSG-AETEYTDAEIIKEQIENWFAERSNASPEILASFPEELPN 171
            | |.........|:|.|.  ...|| ..|||            |..|:.|...:......:.:
plant    81 D-CAMKHSLGPFGENLAAGWGTMSGPVATEY------------WMTEKENYDYDSNTCGGDGV-- 130

  Fly   172 KAVTKFTIAVAEKNTHVGCAAVRFSRDFYNHFVLTCNF-ATSNIVGQPVY 220
              ...:|..|...:..:|||:||...|.|  ..:.|:: ...|.:||..|
plant   131 --CGHYTQIVWRDSVRLGCASVRCKNDEY--IWVICSYDPPGNYIGQRPY 176

Known Domains:

Indicated by green bases in alignment.

Gene	Sequence	Domain	Region	External ID	Identity
scpr-B	NP_650061.1	SCP_euk	58..210	CDD:240180	34/155 (22%)
PR-1-LIKE	NP_179589.1	CAP_PR-1	42..176	CDD:349400	38/168 (23%)

Information from Original Tools:

Tool	Simple Score	Weighted Score	Original Tool Information
Tool	Simple Score	Weighted Score	BLAST Result	Score	Score Type	Cluster ID
Domainoid	0	0.000	Not matched by this tool.
eggNOG	1	0.900	-	-		E1_COG2340
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	1	1.010	-	-		D1528782at2759
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	0	0.000	Not matched by this tool.
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	0	0.000	Not matched by this tool.
TreeFam	0	0.000	Not matched by this tool.
	2	1.910