DRSC/TRiP Functional Genomics Resources

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Protein Alignment scpr-B and AT2G19980

DIOPT Version :9

Sequence 1:NP_650061.1 Gene:scpr-B / 41357 FlyBaseID:FBgn0037888 Length:262 Species:Drosophila melanogaster
Sequence 2:NP_179588.1 Gene:AT2G19980 / 816517 AraportID:AT2G19980 Length:165 Species:Arabidopsis thaliana


Alignment Length:106 Identity:30/106 - (28%)
Similarity:42/106 - (39%) Gaps:20/106 - (18%)


- Green bases have known domain annotations that are detailed below.


  Fly   116 ERFAYAGQNNALFQYSGAETEYTDAEIIKEQIENWFAERSNASPEILASF-PEELP--NKAVTK- 176
            :|:|.....:...:||      ||....:.....|.......|..|...| ..|.|  |.|..| 
plant    57 QRYANVRSQDCAMKYS------TDGTYGENIAAGWVQPMDTMSGPIATKFWFTEKPYYNYATNKC 115

  Fly   177 ------FTIAVAEKNTHVGCAAVRFSRDFYNHFV-LTCNFA 210
                  :|..||.::||:||..||.   |.|.:| :.||:|
plant   116 SEPCGHYTQIVANQSTHLGCGTVRC---FKNEYVWVVCNYA 153

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
scpr-BNP_650061.1 SCP_euk 58..210 CDD:240180 29/104 (28%)
AT2G19980NP_179588.1 SCP 35..165 CDD:294090 30/106 (28%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG2340
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1528782at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.910

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