DRSC/TRiP Functional Genomics Resources

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Protein Alignment scpr-B and crispl

DIOPT Version :9

Sequence 1:NP_650061.1 Gene:scpr-B / 41357 FlyBaseID:FBgn0037888 Length:262 Species:Drosophila melanogaster
Sequence 2:NP_001025526.1 Gene:crispl / 594930 XenbaseID:XB-GENE-5768874 Length:314 Species:Xenopus tropicalis


Alignment Length:219 Identity:53/219 - (24%)
Similarity:79/219 - (36%) Gaps:69/219 - (31%)


- Green bases have known domain annotations that are detailed below.


  Fly    42 ENCPKDVREVKIEPHHKLILNLFNELRNNVAGGKIEGLPKAVRMAKMSWCEELSHLALLNVKTCE 106
            :|.|.......:|.:.:.|||:.||||.|..       |....|.||.|.:       |..|:..
 Frog    93 KNVPFSALSTDLESNRQSILNVHNELRRNAN-------PPPSNMLKMVWSD-------LAAKSAA 143

  Fly   107 SLPDKCRSTERFAYAGQNNALFQYSGAETEYTDAEIIKEQI------ENWFAERSNAS-PEILAS 164
            ...:.|:               ||...:.|.|        |      ||.|.....|| .:::.:
 Frog   144 KWANSCK---------------QYHSLKPERT--------IPGFSCGENLFMASYKASWEDVIRA 185

  Fly   165 FPEELPN-----------KAVTKFTIAVAEKNTHVGCAAVR-----FSRDFYNHFVLTCNFATS- 212
            |..|:.:           ..:..||..:...:..|||||.:     .|.:||  ||  |::|.: 
 Frog   186 FYSEIEDFLYGKGAKEVGLQILHFTQVMWFSSWLVGCAAAQCPITDHSLEFY--FV--CHYAPAG 246

  Fly   213 --NIVGQPVYT--PGEKATTGCKN 232
              ..||.|..|  |.|...:.|:|
 Frog   247 NYGNVGIPYKTGKPCEDCKSSCEN 270

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
scpr-BNP_650061.1 SCP_euk 58..210 CDD:240180 41/174 (24%)
crisplNP_001025526.1 CAP_CRISP 106..245 CDD:349402 42/179 (23%)
Crisp 261..314 CDD:369954 3/10 (30%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1528782at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
11.010

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