DRSC/TRiP Functional Genomics Resources

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Protein Alignment scpr-B and r3hdml

DIOPT Version :10

Sequence 1:NP_650061.1 Gene:scpr-B / 41357 FlyBaseID:FBgn0037888 Length:262 Species:Drosophila melanogaster
Sequence 2:NP_001373427.1 Gene:r3hdml / 561976 ZFINID:ZDB-GENE-090313-275 Length:252 Species:Danio rerio


Alignment Length:211 Identity:50/211 - (23%)
Similarity:78/211 - (36%) Gaps:46/211 - (21%)


- Green bases have known domain annotations that are detailed below.


  Fly    60 ILNLFNELRNNVAGGKIEGLPKAVRMAKMSWCEELSHLALLNVKTCESLPDKC---RSTERF-AY 120
            :|:..|.:|:.|       .|.|..|..|.|.|.|:       |:.|....:|   .....| .:
Zfish    69 LLDYHNRVRSQV-------FPPAANMEYMVWDERLA-------KSAEFWASQCIWEHGPHHFLQH 119

  Fly   121 AGQNNALFQYSGAETEYTDAEIIKEQIENWFAERSNASPEILASFPEELPNKAVTKFTIAVAEKN 185
            .|||.::.  ||......|.      :::|:.||.:      .|:|........|.:|..|...:
Zfish   120 IGQNLSII--SGRYKSIIDL------VKSWYDERHS------FSYPSRCSGSVCTHYTQMVWAAS 170

  Fly   186 THVGCAAVRFSRDFY------NHFVLTCNFA-TSNIVGQPVYTPGEKATTGCKNRYGAAYDYPNL 243
            ..:|||..:.|..|.      ...:|.||:| ..|.||:..|..| :..:.|.:.||.:      
Zfish   171 NKIGCAIKKCSDIFVFGSMWKQATLLVCNYAIKGNWVGEAPYKIG-RPCSACPSSYGGS------ 228

  Fly   244 CYAKEIYDNEKVIENT 259
            |...:.....|...||
Zfish   229 CNKNQCDSRPKSRRNT 244

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
scpr-BNP_650061.1 CAP_euk 57..210 CDD:349399 37/159 (23%)
r3hdmlNP_001373427.1 CAP_R3HDML 66..201 CDD:349409 37/159 (23%)

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