DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment scpr-B and Glipr1l1

DIOPT Version :10

Sequence 1:NP_650061.1 Gene:scpr-B / 41357 FlyBaseID:FBgn0037888 Length:262 Species:Drosophila melanogaster
Sequence 2:NP_001418945.1 Gene:Glipr1l1 / 503139 RGDID:1563000 Length:235 Species:Rattus norvegicus


Alignment Length:256 Identity:58/256 - (22%)
Similarity:89/256 - (34%) Gaps:59/256 - (23%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MAIKCLILLTSLLGISLAADYCALPTCLDK---HIACNNKGNFSENCPKDVREVKIEPHHKLILN 62
            ||:|..::....|.:.|.|.  .||....|   .:...|...|...                .||
  Rat     1 MALKKKLIFLWTLALYLVAS--RLPKAFGKVLPRVPTINDPEFKNG----------------FLN 47

  Fly    63 LFNELRNNVAGGKIEGLPKAVRMAKMSWCEELSHLALLNVKTCESLPDKCRS-----TERFAYAG 122
            ..||.|..|.       |.|..|.::||.:.|:.||....:.|:...:.|.|     |:.:.|.|
  Rat    48 SHNEARRKVQ-------PPASNMNQLSWDKSLAKLAKSWTRECKFSHNPCTSKRHGCTKDYDYIG 105

  Fly   123 QNNALFQYSGAETEYTDAEIIKEQIENWFAERSNASPEILASFPEELPNKAVTKFTIAVAEKNTH 187
            :|    .|.|.    .||. .::.:.:|:.|..:      .:|.:....|....:|..|..|...
  Rat   106 EN----IYLGK----IDAR-PEDVVFSWYNETKD------YNFDDNTCTKTCGHYTQVVWAKTLK 155

  Fly   188 VGCAAVRFSR-DFYNHFVLTCNFATSN--------IVGQPVYTPGEKATTG--CKNRYGAA 237
            :|||...... ..|:..:..||:..:.        |.|:|....|||....  |.:..|.|
  Rat   156 IGCAISNCPHLTGYSAGLFVCNYVPAGNFQGSKPYIKGEPCSMCGEKECVNSLCSHTMGRA 216

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
scpr-BNP_650061.1 CAP_euk 57..210 CDD:349399 38/158 (24%)
Glipr1l1NP_001418945.1 CAP 40..182 CDD:412178 39/179 (22%)

Return to query results.
Submit another query.