DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment scpr-B and glipr1b

DIOPT Version :10

Sequence 1:NP_650061.1 Gene:scpr-B / 41357 FlyBaseID:FBgn0037888 Length:262 Species:Drosophila melanogaster
Sequence 2:XP_005159058.1 Gene:glipr1b / 393547 ZFINID:ZDB-GENE-040426-1459 Length:255 Species:Danio rerio


Alignment Length:172 Identity:32/172 - (18%)
Similarity:60/172 - (34%) Gaps:42/172 - (24%)


- Green bases have known domain annotations that are detailed below.


  Fly    89 SWCEELSHLALLNVKTCESLPDKCRSTERFAYAGQNNALFQYSGAETEYTDAEIIKEQIEN---- 149
            ||.:||:       |........|:.:...:.....:.||.:.| |..:..:......:||    
Zfish    67 SWDKELA-------KGARDRARHCKGSHYPSLGHFGHPLFGWMG-ENIWLGSPFSAFSVENAVHR 123

  Fly   150 W-----FAERSNASPEILASFPEELPNKAVTKFTIAVAEKNTHVGCAAVRFSR---DFYNH---F 203
            |     ::.::|....:...:.:.:.:   |.|         .:|||....|:   :|..|   .
Zfish   124 WSKEGAYSVKNNNCSRLCGHYAQLMWS---TSF---------KMGCAVNVCSKGIENFSTHPEST 176

  Fly   204 VLTCNFA-TSNIVGQPVYTPGEKATTGCKNRYGAAYDYPNLC 244
            :..||:. |..:.|...|.  ....:||    |:.....|:|
Zfish   177 IFVCNYGDTGQVHGVTPYM--AMGCSGC----GSEICRDNVC 212

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
scpr-BNP_650061.1 CAP_euk 57..210 CDD:349399 24/135 (18%)
glipr1bXP_005159058.1 CAP 32..186 CDD:412178 24/138 (17%)

Return to query results.
Submit another query.