DRSC/TRiP Functional Genomics Resources

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Protein Alignment scpr-B and Clec18a

DIOPT Version :10

Sequence 1:NP_650061.1 Gene:scpr-B / 41357 FlyBaseID:FBgn0037888 Length:262 Species:Drosophila melanogaster
Sequence 2:XP_030099497.1 Gene:Clec18a / 353287 MGIID:2672935 Length:615 Species:Mus musculus


Alignment Length:259 Identity:60/259 - (23%)
Similarity:86/259 - (33%) Gaps:67/259 - (25%)


- Green bases have known domain annotations that are detailed below.


  Fly     6 LILLTSLLGISLAADYCALPTCLDKHIACNNKGNFSENCPKDVREVKIEPHHKLILNLFNELRNN 70
            |:||.|||||:........|.......|.:.|.:|                  |||...|.||:.
Mouse    94 LLLLLSLLGITWTEVQPPQPKQDPTLQALSRKESF------------------LILTAHNRLRSR 140

  Fly    71 VAGGKIEGLPKAVRMAKMSWCEELSHLALLNVKTCES--LPDKCRSTERFAYAGQNNALFQYSGA 133
            |.       |.|..|.:|.|.|.|:.||......|.:  .|:...:....::.|.|..|.....|
Mouse   141 VH-------PPAANMQRMDWSESLAQLAEARAALCVTSVTPNLASTPGHNSHVGWNVQLMPMGSA 198

  Fly   134 ETEYTDAEIIKEQIENWFAE-----RSNASPEILASFPEELPNKAVTKFTIAVAEKNTHVGCAAV 193
            .        ..|.:..||||     ..:|         |...|.....:|..|...::.:||...
Mouse   199 S--------FVEVVNLWFAEGLQYRHGDA---------ECAHNATCAHYTQLVWATSSQLGCGRQ 246

  Fly   194 RFSRDFYNHFVLTCNFATS---NIVGQPVYTPGEKAT---------TGCKNRYGAAYDYP-NLC 244
            ....|........|.::..   :|.|:.| .|.:|.|         :||..    |:|:. .||
Mouse   247 PCFVDQEAMEAFVCAYSPGGNWDINGKTV-APYKKGTWCSLCTARVSGCFK----AWDHAGGLC 305

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
scpr-BNP_650061.1 CAP_euk 57..210 CDD:349399 36/159 (23%)
Clec18aXP_030099497.1 CAP_euk 129..263 CDD:349399 36/157 (23%)
EGF_Lam 315..360 CDD:214543
CLECT 390..514 CDD:153057
Blue background indicates that the domain is not in the aligned region.

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