DRSC/TRiP Functional Genomics Resources

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Protein Alignment scpr-B and glipr2

DIOPT Version :10

Sequence 1:NP_650061.1 Gene:scpr-B / 41357 FlyBaseID:FBgn0037888 Length:262 Species:Drosophila melanogaster
Sequence 2:NP_001410593.1 Gene:glipr2 / 325699 ZFINID:ZDB-GENE-030131-4424 Length:543 Species:Danio rerio


Alignment Length:169 Identity:37/169 - (21%)
Similarity:60/169 - (35%) Gaps:51/169 - (30%)


- Green bases have known domain annotations that are detailed below.


  Fly    67 LRNNVAGGKIEGLPKAVRMAKMS-----WCEELSHLALLNVKT-CESLPDKCRSTERFAYAGQNN 125
            |:.:.|..|..|.|.......:|     |.|.     ||:::| ..|..|.          |: |
Zfish   202 LQTHNAYRKHHGAPPLTININLSRSAQKWAEH-----LLSIRTLMHSNGDH----------GE-N 250

  Fly   126 ALFQYSGAETEYTDAEIIKEQIENWFAERSNASPEILASFPEELP--NKAVTKFTIAVAEKNTHV 188
            ..:.|:.|..:.|.    :|.:|:|:.|        :..:....|  :.....||..|.:.:..:
Zfish   251 VYYAYNSANKKLTG----REAVESWYNE--------IKEYNFSRPGFSSKTGHFTQVVWKDSKEL 303

  Fly   189 GCAAVRFSRDFYNHFVLTCNFATSNIVGQPVYTPGEKAT 227
            |..             |..:.:||.:|||  |.||...|
Zfish   304 GVG-------------LATDGSTSFVVGQ--YLPGGNIT 327

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
scpr-BNP_650061.1 CAP_euk 57..210 CDD:349399 28/150 (19%)
glipr2NP_001410593.1 CAP_GAPR1-like 5..135 CDD:349401
CAP_GAPR1-like 196..326 CDD:349401 36/166 (22%)
PRK09926 293..>399 CDD:236634 13/50 (26%)
CAP_GAPR1-like 397..528 CDD:349401
Blue background indicates that the domain is not in the aligned region.

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