DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment scpr-B and Glipr1

DIOPT Version :10

Sequence 1:NP_650061.1 Gene:scpr-B / 41357 FlyBaseID:FBgn0037888 Length:262 Species:Drosophila melanogaster
Sequence 2:NP_001011987.1 Gene:Glipr1 / 299783 RGDID:1305978 Length:251 Species:Rattus norvegicus


Alignment Length:274 Identity:56/274 - (20%)
Similarity:87/274 - (31%) Gaps:85/274 - (31%)


- Green bases have known domain annotations that are detailed below.


  Fly     8 LLTSLLGISLAADYCALPTCLDKHIACNNKGNFSENCPKDVREVKIEPHHKLILNLFNELRNNVA 72
            :.:|..|.|..|.  .||...::        :|.|.|        :|.|        |..|:   
  Rat    11 MASSASGFSYTAS--TLPKITNE--------DFIEEC--------VEVH--------NHFRS--- 46

  Fly    73 GGKIEGLPKAVRMAKMSWCEELSHLALLNVKTC--ESLPD-KCRSTERFAYAGQN---NALFQYS 131
                :..|.|..|..|||..:|:.:|....::|  :..|. ..|....|...|:|   .:|..:|
  Rat    47 ----KAYPPAGNMLYMSWDPKLAQIAKAWAQSCVFQHNPQLHSRIHPNFTGLGENIWLGSLSLFS 107

  Fly   132 GAETEYTDAEIIKEQIENWFAERSNASPEILASFPEELPNKAVTKFTIAVAEKNTHVGCAAVRFS 196
                       ::..|..||.|..      ...|......|....:|..|...:..:|||.....
  Rat   108 -----------VRAAILAWFEESQ------YYDFSTGKCKKVCGHYTQIVWADSYKIGCAVQLCP 155

  Fly   197 RDFYNHFVLTCNFATSNIVGQPVYTPGEKATTG-------CKNRYGAAYDYPNLC-------YAK 247
            |.  .:|:  ||:..:.  ..|.:...:.||..       |.|         |||       .::
  Rat   156 RG--ANFI--CNYGPAG--NYPTWPYKQGATCSACPKDDKCLN---------NLCTNPQRDQVSR 205

  Fly   248 EIYDNEKVIENTQT 261
            ...|..|.:.|..|
  Rat   206 HSADYPKYLRNRYT 219

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
scpr-BNP_650061.1 CAP_euk 57..210 CDD:349399 33/158 (21%)
Glipr1NP_001011987.1 CAP 32..168 CDD:412178 38/179 (21%)

Return to query results.
Submit another query.