DRSC/TRiP Functional Genomics Resources

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Protein Alignment scpr-B and scl-19

DIOPT Version :10

Sequence 1:NP_650061.1 Gene:scpr-B / 41357 FlyBaseID:FBgn0037888 Length:262 Species:Drosophila melanogaster
Sequence 2:NP_507654.2 Gene:scl-19 / 191308 WormBaseID:WBGene00013971 Length:207 Species:Caenorhabditis elegans


Alignment Length:229 Identity:50/229 - (21%)
Similarity:87/229 - (37%) Gaps:55/229 - (24%)


- Green bases have known domain annotations that are detailed below.


  Fly     7 ILLTSLLGISLAADYCALPTCLDKHIACNNKGNFSENCPKDVREVKIEPHHKLILNLFNELRNNV 71
            :||..||.||                  ::.|..|.|            ..:.:|:..|:||:.|
 Worm     3 LLLFLLLAIS------------------SSSGQLSPN------------GRQQVLDFHNKLRSQV 37

  Fly    72 ------AGGKIEGLPKAVRMAKMSWCEELSHLALLNVKTCESLPDKCRSTERFAYAGQNNALFQY 130
                  |.|.|:  |.|..|.::::.::...||...|..|   ||.....     .|:|..:..|
 Worm    38 ALGVFSANGTIK--PPARNMERLTYGQQFERLAQDYVADC---PDGLEIP-----IGRNIGMNYY 92

  Fly   131 SGA--ETEYTDAEIIKEQIENWFAERSNASPEILASFPEELPNKAVTKFTIAVAEKNTHVGCAAV 193
            :..  ||..:..|.:.:.:.:| ||....:..:...:.:    .:::..:..|.....:|||...
 Worm    93 TTKVDETYNSMDEYVIDALNDW-AEEFQVNGWLSTIYND----TSISAASQMVWAGTKYVGCGVK 152

  Fly   194 RFSRDFYNHFVLTCNFATSNIVGQPVYTPGEKAT 227
            |.  |..|..|:...:...|:||:|:|..|...|
 Worm   153 RC--DPINVVVVCMYYQQGNLVGRPIYKEGPPCT 184

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
scpr-BNP_650061.1 CAP_euk 57..210 CDD:349399 34/160 (21%)
scl-19NP_507654.2 SCP 21..167 CDD:214553 35/174 (20%)

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