DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment scpr-B and scl-12

DIOPT Version :10

Sequence 1:NP_650061.1 Gene:scpr-B / 41357 FlyBaseID:FBgn0037888 Length:262 Species:Drosophila melanogaster
Sequence 2:NP_504056.1 Gene:scl-12 / 186714 WormBaseID:WBGene00019178 Length:208 Species:Caenorhabditis elegans


Alignment Length:197 Identity:44/197 - (22%)
Similarity:67/197 - (34%) Gaps:65/197 - (32%)


- Green bases have known domain annotations that are detailed below.


  Fly    60 ILNLFNELRNNV------AGGKIEGLPKAVRMAKMSWCEELSHLALLNVKTCESLPDKCRSTE-- 116
            |:...|:||:.:      |.|.||  |.|..|.|:.|...::..|.....||   ||....||  
 Worm    26 IVKAHNDLRSAIALGNYDAAGTIE--PPAANMRKIKWDSTVASSAQQYANTC---PDDHSGTEYG 85

  Fly   117 ----------------RFAYAGQNN--ALFQYSGAETEYTDAEIIKEQIENWFAERSNASPEILA 163
                            :|..|..|:  ..||..|.|:.|.||::....|       .:|:     
 Worm    86 ENLYWSWSSSAPTSLDKFGVAASNSWEKEFQDYGWESTYMDADLFDSGI-------GHAT----- 138

  Fly   164 SFPEELPNKAVTKFTIAVAEKNTHVGCAAVRFSRD-----FYNHFVLTCNF-ATSNIVGQPVYTP 222
                          .:|.||.| .:||......:|     .|. ..:.|.: ...|::...:|..
 Worm   139 --------------QMAWAETN-KIGCGVKNCGKDSSMNNMYK-VAVVCQYDQAGNMMDSDIYQS 187

  Fly   223 GE 224
            |:
 Worm   188 GD 189

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
scpr-BNP_650061.1 CAP_euk 57..210 CDD:349399 41/181 (23%)
scl-12NP_504056.1 SCP 21..175 CDD:214553 41/181 (23%)

Return to query results.
Submit another query.