DRSC/TRiP Functional Genomics Resources

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Protein Alignment scpr-B and scl-1

DIOPT Version :10

Sequence 1:NP_650061.1 Gene:scpr-B / 41357 FlyBaseID:FBgn0037888 Length:262 Species:Drosophila melanogaster
Sequence 2:NP_502502.1 Gene:scl-1 / 186053 WormBaseID:WBGene00004742 Length:207 Species:Caenorhabditis elegans


Alignment Length:192 Identity:38/192 - (19%)
Similarity:72/192 - (37%) Gaps:34/192 - (17%)


- Green bases have known domain annotations that are detailed below.


  Fly    60 ILNLFNELRNNVAGGKIEGLPKAVRMAKMSWCEELSHLALLNV-----KTCESLPDKCRSTERFA 119
            |::..|:||:.:|        |:..:||.:..|..:.:..:.|     .:.::..:.|.:.....
 Worm    24 IVDAHNKLRSAIA--------KSTYVAKGTKKEPATDMRKMVVDSTVAASAQNYANTCPTGHSKG 80

  Fly   120 YAGQNNALFQYSGAETEYTDA--EIIKEQIENWFAE---RSNASPEILASFPEELPNKAVTKFTI 179
            .....|..:.::.|:....|:  ||.....|..|.:   :|||....|.       |..:...|.
 Worm    81 TGYGENLYWSWTSADVGSLDSYGEIAAAAWEKEFQDFGWKSNAMDTTLF-------NSGIGHATQ 138

  Fly   180 AVAEKNTHVGCAAVRFSRDF----YNHFVLTCNFA-TSNIVGQPVYTPGEKATTGCKNRYGA 236
            ......:.:||......||.    .|...:.|.:: ..|.:|:|:|..|    |.|.:..|:
 Worm   139 MAWANTSSIGCGVKNCGRDASMRNMNKIAVVCQYSPPGNTMGRPIYKEG----TTCSSCSGS 196

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
scpr-BNP_650061.1 CAP_euk 57..210 CDD:349399 30/163 (18%)
scl-1NP_502502.1 SCP 19..174 CDD:214553 30/164 (18%)

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