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Protein Alignment scpr-B and scl-1
DIOPT Version :9
Sequence 1: | NP_650061.1 |
Gene: | scpr-B / 41357 |
FlyBaseID: | FBgn0037888 |
Length: | 262 |
Species: | Drosophila melanogaster |
Sequence 2: | NP_502502.1 |
Gene: | scl-1 / 186053 |
WormBaseID: | WBGene00004742 |
Length: | 207 |
Species: | Caenorhabditis elegans |
Alignment Length: | 192 |
Identity: | 38/192 - (19%) |
Similarity: | 72/192 - (37%) |
Gaps: | 34/192 - (17%) |
- Green bases have known domain annotations that are detailed below.
Fly 60 ILNLFNELRNNVAGGKIEGLPKAVRMAKMSWCEELSHLALLNV-----KTCESLPDKCRSTERFA 119
|::..|:||:.:| |:..:||.:..|..:.:..:.| .:.::..:.|.:.....
Worm 24 IVDAHNKLRSAIA--------KSTYVAKGTKKEPATDMRKMVVDSTVAASAQNYANTCPTGHSKG 80
Fly 120 YAGQNNALFQYSGAETEYTDA--EIIKEQIENWFAE---RSNASPEILASFPEELPNKAVTKFTI 179
.....|..:.::.|:....|: ||.....|..|.: :|||....|. |..:...|.
Worm 81 TGYGENLYWSWTSADVGSLDSYGEIAAAAWEKEFQDFGWKSNAMDTTLF-------NSGIGHATQ 138
Fly 180 AVAEKNTHVGCAAVRFSRDF----YNHFVLTCNFA-TSNIVGQPVYTPGEKATTGCKNRYGA 236
......:.:||......||. .|...:.|.:: ..|.:|:|:|..| |.|.:..|:
Worm 139 MAWANTSSIGCGVKNCGRDASMRNMNKIAVVCQYSPPGNTMGRPIYKEG----TTCSSCSGS 196
|
Known Domains:
Indicated by green bases in alignment.
Gene | Sequence | Domain | Region |
External ID | Identity |
scpr-B | NP_650061.1 |
SCP_euk |
58..210 |
CDD:240180 |
30/163 (18%) |
scl-1 | NP_502502.1 |
SCP |
19..174 |
CDD:214553 |
30/164 (18%) |
Information from Original Tools:
Tool |
Simple Score |
Weighted Score |
Original Tool Information |
BLAST Result |
Score |
Score Type |
Cluster ID |
Compara |
0 | 0.000 |
Not matched by this tool. |
Domainoid |
1 |
1.000 |
41 |
1.000 |
Domainoid score |
I8510 |
eggNOG |
1 |
0.900 |
- |
- |
|
E1_COG2340 |
Hieranoid |
0 | 0.000 |
Not matched by this tool. |
Homologene |
0 | 0.000 |
Not matched by this tool. |
Inparanoid |
1 |
1.050 |
71 |
1.000 |
Inparanoid score |
I3895 |
Isobase |
0 | 0.000 |
Not matched by this tool. |
OMA |
0 | 0.000 |
Not matched by this tool. |
OrthoDB |
1 |
1.010 |
- |
- |
|
D1528782at2759 |
OrthoFinder |
0 | 0.000 |
Not matched by this tool. |
OrthoInspector |
0 | 0.000 |
Not matched by this tool. |
orthoMCL |
0 | 0.000 |
Not matched by this tool. |
Panther |
1 |
1.100 |
- |
- |
O |
PTHR10334 |
Phylome |
1 |
0.910 |
- |
- |
|
|
RoundUp |
0 | 0.000 |
Not matched by this tool. |
SonicParanoid |
0 | 0.000 |
Not matched by this tool. |
SwiftOrtho |
0 | 0.000 |
Not matched by this tool. |
TreeFam |
0 | 0.000 |
Not matched by this tool. |
|
6 | 5.970 |
|
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