DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment scpr-B and scl-14

DIOPT Version :10

Sequence 1:NP_650061.1 Gene:scpr-B / 41357 FlyBaseID:FBgn0037888 Length:262 Species:Drosophila melanogaster
Sequence 2:NP_502532.1 Gene:scl-14 / 184246 WormBaseID:WBGene00008625 Length:208 Species:Caenorhabditis elegans


Alignment Length:189 Identity:45/189 - (23%)
Similarity:65/189 - (34%) Gaps:23/189 - (12%)


- Green bases have known domain annotations that are detailed below.


  Fly    60 ILNLFNELRNNVAGGK--IEGLPK--AVRMAKMSWCEELSHLALLNVKTCESLPDKCRSTERFAY 120
            |||:.|.||:.:|.|.  ..|..|  |..|.||.|...|:..:.:....|.:      .......
 Worm    27 ILNVHNTLRSRIAKGTYVARGTVKHAASDMLKMKWLRSLATSSQIYANRCPT------GHSNMIG 85

  Fly   121 AGQNNALFQYSGAETEYTD-AEIIKEQIENWFAERSNASPEILASFPEELPNKAVTKFTIAVAEK 184
            .|:|...:..||..|.... ..:.....|..|.:...:|..:..|    |.|..|...|.....|
 Worm    86 VGENLYWYWTSGTITNIDQFGAMASAAWEKEFQDYGWSSNTLTMS----LFNSGVGHATQMAWAK 146

  Fly   185 NTHVGCAAVRFSRDF--YNHFVLTCNF-ATSNIVGQPVYTPGE-----KATTGCKNRYG 235
            ...:||.......|.  .|...:.|:: ...|.:.|.:||.|.     .|.|.|:...|
 Worm   147 TNLIGCGVKNCGMDTNGMNKVAVVCHYQPQGNYLNQNIYTSGTTCSKCPAGTSCEAATG 205

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
scpr-BNP_650061.1 CAP_euk 57..210 CDD:349399 36/157 (23%)
scl-14NP_502532.1 SCP 22..175 CDD:214553 36/157 (23%)

Return to query results.
Submit another query.