DRSC/TRiP Functional Genomics Resources

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Protein Alignment scpr-B and scl-24

DIOPT Version :9

Sequence 1:NP_650061.1 Gene:scpr-B / 41357 FlyBaseID:FBgn0037888 Length:262 Species:Drosophila melanogaster
Sequence 2:NP_507429.1 Gene:scl-24 / 184188 WormBaseID:WBGene00008575 Length:212 Species:Caenorhabditis elegans


Alignment Length:232 Identity:50/232 - (21%)
Similarity:79/232 - (34%) Gaps:74/232 - (31%)


- Green bases have known domain annotations that are detailed below.


  Fly    50 EVKIEPHHKL-------ILNLFNELRNNVAGGKIE--GLPKAVRMAKMSWCEELSHLALLNVKT- 104
            |....|.|:.       |:.:.|:|||..:.|..|  .:.|:..|..:||.|.|    :..|:. 
 Worm    17 ERHFNPQHQWNAEAIDNIVFIHNKLRNAASHGLWERYSISKSSNMQLLSWNESL----VAEVENE 77

  Fly   105 ---CE-----SLPDKCRSTERFAYAGQNNALFQYSGAETEYTDAE------IIKEQIENWFAERS 155
               ||     :||.|         .|.|  ::||.  ...|.|.:      .|.:...|......
 Worm    78 KYYCEPADNKNLPIK---------LGDN--IYQYD--VNTYDDIDGVGAMGSINKDTHNALKSEE 129

  Fly   156 NASPEILASFPEELPNKAVTKFTIAVAEKNTHVGCAAVRFSRD-------FYNHFVLTCNFA--T 211
            .|:...|...               :..|:..:||  :..|.|       .||..::.|.::  .
 Worm   130 KATKNRLRQM---------------LYSKSKSIGC--IYESCDKIDSKGINYNTRLVICKYSPPL 177

  Fly   212 SNIVGQPVYTPGEKATTGCKNRYGAAYDYPN----LC 244
            .|| .:.::..||.. :.|.:......| ||    ||
 Worm   178 ENI-DEQLFDKGEPC-SNCPSGTSCGTD-PNEMMKLC 211

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
scpr-BNP_650061.1 SCP_euk 58..210 CDD:240180 37/182 (20%)
scl-24NP_507429.1 CAP_euk 31..174 CDD:349399 37/176 (21%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG2340
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1528782at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR10334
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
43.920

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