DRSC/TRiP Functional Genomics Resources

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Protein Alignment scpr-B and scl-8

DIOPT Version :9

Sequence 1:NP_650061.1 Gene:scpr-B / 41357 FlyBaseID:FBgn0037888 Length:262 Species:Drosophila melanogaster
Sequence 2:NP_502510.1 Gene:scl-8 / 183345 WormBaseID:WBGene00008030 Length:210 Species:Caenorhabditis elegans


Alignment Length:198 Identity:46/198 - (23%)
Similarity:63/198 - (31%) Gaps:38/198 - (19%)


- Green bases have known domain annotations that are detailed below.


  Fly    60 ILNLFNELRNNVAGGK--IEGLPK--AVRMAKMSWCEELSHLALLNVKTC---ESLPDKCRSTER 117
            |||..|::|:.:|.|.  .:|..|  |..|.||.|...|...|......|   .|..||.     
 Worm    26 ILNAHNDIRSRIAKGNYVAKGNRKESATNMLKMKWDSSLEQSAQNYANGCHMQHSTNDKT----- 85

  Fly   118 FAYAGQNNALFQYSGAETEYTD-----AEIIKEQIENWFAERSNASPEILASFPEELPNKAVTKF 177
               .|: |..:::||......|     |.:..:.....|...||       .|...|.|..|...
 Worm    86 ---IGE-NLYWEWSGDPFSDLDKFGKIATVAWDHEFEQFGWNSN-------KFSLALFNTGVAHA 139

  Fly   178 TIAVAEKNTHVGCAAVRFSRDFYN----HFVLTCNF-ATSNIVGQPVYTPGE-----KATTGCKN 232
            |.........:||......||...    ...:.|.: ...|...:.:|..|.     .|.|.|:.
 Worm   140 TQIAWAPTGKIGCGVKNCGRDARRGGLFQVAIVCQYRVRGNFFFKNIYNSGATCSACPAGTSCEQ 204

  Fly   233 RYG 235
            ..|
 Worm   205 STG 207

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
scpr-BNP_650061.1 SCP_euk 58..210 CDD:240180 39/166 (23%)
scl-8NP_502510.1 SCP 22..175 CDD:214553 39/164 (24%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 41 1.000 Domainoid score I8510
eggNOG 1 0.900 - - E1_COG2340
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 71 1.000 Inparanoid score I3895
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1528782at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR10334
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
65.970

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