DRSC/TRiP Functional Genomics Resources

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Protein Alignment scpr-B and scl-6

DIOPT Version :10

Sequence 1:NP_650061.1 Gene:scpr-B / 41357 FlyBaseID:FBgn0037888 Length:262 Species:Drosophila melanogaster
Sequence 2:NP_502508.1 Gene:scl-6 / 183343 WormBaseID:WBGene00008028 Length:209 Species:Caenorhabditis elegans


Alignment Length:246 Identity:55/246 - (22%)
Similarity:82/246 - (33%) Gaps:60/246 - (24%)


- Green bases have known domain annotations that are detailed below.


  Fly     6 LILLTSLLGISLAADYCALPTCLDKHIACNNKGNFSENCPKDVREVKIEPHHKLILNLFNELRNN 70
            |:..||||.:.:.|:                   ||.:.            .:.|::|.|..|:.
 Worm     5 LVFATSLLIVLVDAE-------------------FSSST------------QQFIVDLHNSFRSK 38

  Fly    71 VAGG--KIEGL--PKAVRMAKMSWCEELSHLALLNVKTCESLPDKCRSTERFAY----AGQNNAL 127
            :|.|  .|.|.  |....:.||||...|:..|.....||.:.....:.|....|    :...:.|
 Worm    39 LATGTYSINGTLKPAGSNIRKMSWDSTLATSAQTYANTCPTGFSNTQGTGENLYWRTTSANISGL 103

  Fly   128 FQYSGAETEYTDAEIIKEQIENWFAERSNASPEILASFPEELPNKAVTKFTIAVAEKNTHVGCAA 192
            ..|.||      |.:..||....:...:|       .|.:||.:..|...|.....|...|||..
 Worm   104 DIYGGA------ASVSWEQEFQKYGWATN-------YFSQELFDTGVGNGTQMAWAKTNLVGCGV 155

  Fly   193 VRFSRDF--YNHFVLTCNF-ATSNIVGQPVYTPGEKAT-----TGCKNRYG 235
            ....:|.  .|...:.|:: .....|.|.:||.|...:     |.|....|
 Worm   156 KNCGKDSTGLNKVAVVCHYKPLGRYVDQMIYTAGFTCSQCPTGTSCDQTTG 206

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
scpr-BNP_650061.1 CAP_euk 57..210 CDD:349399 39/163 (24%)
scl-6NP_502508.1 SCP 23..176 CDD:214553 39/177 (22%)

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