DRSC/TRiP Functional Genomics Resources

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Protein Alignment scpr-B and scl-13

DIOPT Version :9

Sequence 1:NP_650061.1 Gene:scpr-B / 41357 FlyBaseID:FBgn0037888 Length:262 Species:Drosophila melanogaster
Sequence 2:NP_504055.1 Gene:scl-13 / 178798 WormBaseID:WBGene00019179 Length:208 Species:Caenorhabditis elegans


Alignment Length:218 Identity:44/218 - (20%)
Similarity:71/218 - (32%) Gaps:69/218 - (31%)


- Green bases have known domain annotations that are detailed below.


  Fly    60 ILNLFNELRNNVAGGKIEGL----PKAVRMAKMSWCEELSHLALLNVKTCESLPDKCRSTERFAY 120
            |::..|:||:.:|.|.....    |.|..|.|:.|.|.::..|   .:..|..||          
 Worm    26 IVDAHNKLRSAIAQGSYVAAGTQEPSASNMRKIVWDETVAAAA---QEYAEGCPD---------- 77

  Fly   121 AGQNNALFQYSGAETEYTDAEIIKEQIENWFAERSNASPEILASFPEELPNKAVTKF-------- 177
                    .:||  |.|.         ||.:...|:::|..|..|.....|...::|        
 Worm    78 --------DHSG--TSYG---------ENLYWSWSSSAPSSLDKFGVAASNSWESEFQKYGWTST 123

  Fly   178 ---------------TIAVAEKNTHVGCAAVRFSRD-----FYNHFVLTCNF-ATSNIVGQPVYT 221
                           .:|.|| .:.:||......:|     .|. ..:.|.: :..|::...:|.
 Worm   124 FLDEAGFATGIGHATQMAWAE-TSKIGCGIKNCGKDANKKNMYK-VAVVCQYDSAGNMMDSDIYQ 186

  Fly   222 PGEKATTGCKNRYGAAYDYPNLC 244
            .|| ..:.|........| ..||
 Worm   187 QGE-TCSACSEDASCEQD-SGLC 207

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
scpr-BNP_650061.1 SCP_euk 58..210 CDD:240180 36/182 (20%)
scl-13NP_504055.1 SCP 21..174 CDD:214553 36/181 (20%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 41 1.000 Domainoid score I8510
eggNOG 1 0.900 - - E1_COG2340
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 71 1.000 Inparanoid score I3895
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1528782at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR10334
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
65.970

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