DRSC/TRiP Functional Genomics Resources

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Protein Alignment scpr-B and r3hdml

DIOPT Version :9

Sequence 1:NP_650061.1 Gene:scpr-B / 41357 FlyBaseID:FBgn0037888 Length:262 Species:Drosophila melanogaster
Sequence 2:XP_017953344.1 Gene:r3hdml / 100492715 XenbaseID:XB-GENE-1011048 Length:253 Species:Xenopus tropicalis


Alignment Length:233 Identity:56/233 - (24%)
Similarity:88/233 - (37%) Gaps:60/233 - (25%)


- Green bases have known domain annotations that are detailed below.


  Fly    40 FSENCPKDVREVKIEPHH-KLILNLFNELRNNVAGGKIEGLPKAVRMAKMSWCEELSHLALLNVK 103
            |....|:..|:..|.|.. ..:|:..|::|:.|       .|.|..|..|.|.|.|:       |
 Frog    45 FGSGIPRIRRKRYISPRDMSALLDYHNQVRSKV-------FPPAANMEYMVWDERLA-------K 95

  Fly   104 TCESLPDKCR----STERFAYAGQNNALFQYSGAETEYTDAEIIKEQIENWFAERSNASPEILAS 164
            :.||..::|:    ..:...|.|||  |..:||......|.      ::.|:.||.:      .|
 Frog    96 SAESWANQCKWDHGPNQLMRYIGQN--LSVHSGRYRSIVDL------VKGWYDERQH------YS 146

  Fly   165 FPE------ELPNKAV----TKFTIAVAEKNTHVGCA----------AVRFSRDFYNHFVLTCNF 209
            ||.      ..|||..    |.:|..|...:..:|||          ...:.:..|    |.||:
 Frog   147 FPHPRECNPSCPNKCTGAVCTHYTQMVWASSNRIGCAVNICTNINVWGSTWRQASY----LVCNY 207

  Fly   210 A-TSNIVGQPVYTPGEKATTGCKNRYGAAYDYPNLCYA 246
            : ..|.:|:..|..| :..:.|...||.... .|:|::
 Frog   208 SIKGNWIGEAPYKLG-RPCSACPPSYGGVCS-NNMCFS 243

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
scpr-BNP_650061.1 SCP_euk 58..210 CDD:240180 42/175 (24%)
r3hdmlXP_017953344.1 CAP_R3HDML 63..208 CDD:349409 42/176 (24%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 69 1.000 Inparanoid score I5157
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1528782at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR10334
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
33.160

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