DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment scpr-B and glipr1l1

DIOPT Version :10

Sequence 1:NP_650061.1 Gene:scpr-B / 41357 FlyBaseID:FBgn0037888 Length:262 Species:Drosophila melanogaster
Sequence 2:XP_031754789.1 Gene:glipr1l1 / 100490275 XenbaseID:XB-GENE-29080099 Length:291 Species:Xenopus tropicalis


Alignment Length:231 Identity:57/231 - (24%)
Similarity:84/231 - (36%) Gaps:66/231 - (28%)


- Green bases have known domain annotations that are detailed below.


  Fly    60 ILNLFNELRNNVAGGKIEGLPKAVRMAKMSWCEELSHLALLNVKTCESLPDKCRSTE----RFAY 120
            ::|..|::||..  ||     :|..|..|||...|:.||......|:.:|:...:.|    ||..
 Frog    33 LVNAHNDIRNEF--GK-----QAANMLHMSWDVGLAKLAQAWTINCKKVPNPHLNKESIYPRFKQ 90

  Fly   121 AGQNNALFQYSGAETEYTDAEIIKEQIENW-----FAERSNASPEILASFPEELPNKAVTKFTIA 180
            .|:|    .|.|...:      |.:.:.||     |.:..|.|.:         |.|..:.||..
 Frog    91 IGEN----LYMGPSID------IFKIVTNWGLEGNFYDLKNNSCQ---------PGKDCSHFTQI 136

  Fly   181 VAEKNTHVGCAAVRFSRDFYNH---FVLTCNFA-TSNIVGQPVYTPGEKAT---------TGCKN 232
            |......|||.|.     :..|   :|::|.:. ..|::||..:..|.|.:         ..|.|
 Frog   137 VWANTYKVGCGAA-----YCAHKVAYVVSCTYGPRGNLLGQVPFILGVKCSKCGGEKCNVASCGN 196

  Fly   233 -----RYG--------AAYDYPNLCYAKEIYDNEKV 255
                 .||        |..|...|.......:||||
 Frog   197 PSRDENYGDYNYCPPFATIDCYRLSKGNVRVNNEKV 232

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
scpr-BNP_650061.1 CAP_euk 57..210 CDD:349399 41/161 (25%)
glipr1l1XP_031754789.1 CAP 28..167 CDD:412178 41/164 (25%)

Return to query results.
Submit another query.