DRSC/TRiP Functional Genomics Resources

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Protein Alignment scpr-B and crisp1.6

DIOPT Version :9

Sequence 1:NP_650061.1 Gene:scpr-B / 41357 FlyBaseID:FBgn0037888 Length:262 Species:Drosophila melanogaster
Sequence 2:XP_002933627.1 Gene:crisp1.6 / 100379939 XenbaseID:XB-GENE-5838744 Length:237 Species:Xenopus tropicalis


Alignment Length:241 Identity:51/241 - (21%)
Similarity:81/241 - (33%) Gaps:45/241 - (18%)


- Green bases have known domain annotations that are detailed below.


  Fly    17 LAADYCALPTCLDKHIACNNKGNFSEN---CPKDVREVKIEPHHKLILNLFNELRNNVAGGKIEG 78
            |.|..||:|..    |...:.|....:   ....|::|.::.|        |..|.:|.      
 Frog     3 LIAVLCAMPFI----IHAQSTGTLPSSLWTTTSTVQQVIVDTH--------NGYRRSVN------ 49

  Fly    79 LPKAVRMAKMSWCEELSHLALLNVKTCESL--PDKCRSTERFAYAGQNNALFQYSGAETEYTDAE 141
             |.|..|.||.|.|..:..|.....||.:.  |...|:..... .|:|..:..|..:        
 Frog    50 -PSARNMLKMMWSEAAASNAATWSATCPAAHSPTSQRTISGVT-CGENIFIASYPAS-------- 104

  Fly   142 IIKEQIENWFAERSNASPEILASFPEELPNKAVTKFTIAVAEKNTHVGCAAVRFSRDFYNHFVLT 206
             .:|.|..|.:|    |............|:....:|..|...:..||||....:    |.::..
 Frog   105 -WQEAITAWNSE----SQYFQYGVGPTSSNQVTGHYTQLVWYNSYMVGCAVSNCN----NQYIYV 160

  Fly   207 CNFATSNIVGQPVYTPGEKATTGCKNRYGAAYD--YPNLCYAKEIY 250
            |.:.........:.|| .|:...|.:..||..:  ..|.|..:::|
 Frog   161 CQYCPMGNNLNTITTP-YKSGPACGDCPGACDNGLCTNPCPYQDMY 205

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
scpr-BNP_650061.1 SCP_euk 58..210 CDD:240180 32/153 (21%)
crisp1.6XP_002933627.1 CAP_CRISP 32..166 CDD:349402 35/166 (21%)
Crisp 183..236 CDD:369954 6/23 (26%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1528782at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
11.010

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