DRSC - DRSC Integrative Ortholog Prediction Tool

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits

Protein Alignment scpr-B and glipr2

DIOPT Version :9

Sequence 1:	NP_650061.1	Gene:	scpr-B / 41357	FlyBaseID:	FBgn0037888	Length:	262	Species:	Drosophila melanogaster
Sequence 2:	NP_001107504.1	Gene:	glipr2 / 100135358	XenbaseID:	XB-GENE-5758336	Length:	441	Species:	Xenopus tropicalis

Alignment Length:	225	Identity:	51/225 - (22%)
Similarity:	69/225 - (30%)	Gaps:	62/225 - (27%)

- Green bases have known domain annotations that are detailed below.

  Fly    10 TSLLGISLAADYCALPTCLDKHIACNNKGNFSENCPKDVREVKIEPHHKLILNLFNELRNNVAGG 74
            ||.|| :...|....||.                   |.||..:|     .|...|..|:. .|.
Frog    98 TSYLG-TRGTDSALSPTA-------------------DSREFALE-----FLKANNVYRSR-HGA 136

  Fly    75 KIEGLPKAVRMAKMSWCEELSHLALLNVKTCESLPDKCRSTERFAYAGQNNALFQYSGAETEYTD 139
            |...|...:......|.|.     |||:|..:. .|.......:|.:|         |.....|.
Frog   137 KPLQLNSKISQEAQRWAEH-----LLNLKNLKH-SDTSHGENIWAKSG---------GPSITVTG 186

  Fly   140 AEIIKEQIENWFAERSNASPEILASFPEELPNKAVT-KFTIAVAEKNTHVGCAAVRFSRDF---- 199
            .|:    .::|:.|..|.:    .|.|   .|||.| .||..|.:.:..||.......:..
Frog   187 QEV----ADSWYKEEKNYN----FSKP---GNKAKTGHFTQMVWKASKEVGVGLASSGKGMLIVV 240

  Fly   200 --YNHFVLTCNFATSNIVGQPVYTPGEKAT 227
              ||.   :.|.......|:.|...|.|.|
Frog   241 AQYNP---SGNITNPGFYGRNVLPRGSKVT 267

Known Domains:

Indicated by green bases in alignment.

Gene	Sequence	Domain	Region	External ID	Identity
scpr-B	NP_650061.1	SCP_euk	58..210	CDD:240180	35/158 (22%)
glipr2	NP_001107504.1	SCP	<3..69	CDD:294090
		SCP_GAPR-1_like	118..249	CDD:240182	36/165 (22%)
		SCP_GAPR-1_like	295..426	CDD:240182
Blue background indicates that the domain is not in the aligned region.

Information from Original Tools:

Tool	Simple Score	Weighted Score	Original Tool Information
Tool	Simple Score	Weighted Score	BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	0	0.000	Not matched by this tool.
eggNOG	0	0.000	Not matched by this tool.
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	1	1.010	-	-		D1528782at2759
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	0	0.000	Not matched by this tool.
RoundUp	0	0.000	Not matched by this tool.
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	0	0.000	Not matched by this tool.
TreeFam	0	0.000	Not matched by this tool.
	1	1.010