DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG31388 and Zfp626

DIOPT Version :9

Sequence 1:NP_650060.1 Gene:CG31388 / 41355 FlyBaseID:FBgn0051388 Length:446 Species:Drosophila melanogaster
Sequence 2:NP_081979.1 Gene:Zfp626 / 71163 MGIID:1918413 Length:676 Species:Mus musculus


Alignment Length:249 Identity:71/249 - (28%)
Similarity:106/249 - (42%) Gaps:36/249 - (14%)


- Green bases have known domain annotations that are detailed below.


  Fly   197 CSKCGLEFENVDELKLHKYHLHDIPPDTK-FVCDHCDEGFRSAAALTRHCNMINLPL-THSCTKC 259
            |::||..|...|.|||||    .|..:|| |.|..|.:.|:..:.|.:| .:|:..: .:.|::|
Mouse   371 CNECGKAFPFPDRLKLHK----TIHTNTKPFECRECGKSFKCVSHLAQH-RIIHADVKPYECSEC 430

  Fly   260 KSQFHNHILLETHKQRCLRPPASQHVCHICGKHLTTAFNLKNHLVRHAGTRRHKCDQCSASFYTA 324
            ...|:....|..|::  :........|..|||..|....|..|...|.|.:..:|.:|...|||.
Mouse   431 GKAFNRRSNLIQHQK--IHSGEKPFECKDCGKAFTVLPQLTRHQRIHTGEKPFECKECGKKFYTG 493

  Fly   325 AELCSHQKTHTTERPYICRYNCGKTFRFCSARSMHERVHMDASK--------------------- 368
            ..|..||:.||.|:|:.|.. |||.||..:..|.|::.|::...                     
Mouse   494 PHLAQHQRVHTGEKPFECNV-CGKAFRLRACLSEHQKTHIEEKPFKCKLCGSAFRSRYQLSLHRQ 557

  Fly   369 -----RIYQCEYCPKSYVTPSECRTHQKYHNLTRDHGCEICRISFKTAKHYRSH 417
                 |.:||:.|.|:|:..::...||..|...|...|:.|...|.|..|...|
Mouse   558 THPHVRPFQCQECGKAYILLAQLIQHQTVHTGERSFECKECGKKFHTGSHLVQH 611

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG31388NP_650060.1 zf-AD 4..76 CDD:285071
C2H2 Zn finger 228..254 CDD:275368 6/26 (23%)
C2H2 Zn finger 286..306 CDD:275368 7/19 (37%)
C2H2 Zn finger 314..334 CDD:275368 8/19 (42%)
C2H2 Zn finger 342..363 CDD:275368 8/20 (40%)
C2H2 Zn finger 373..393 CDD:275368 6/19 (32%)
C2H2 Zn finger 401..419 CDD:275368 6/17 (35%)
Zfp626NP_081979.1 KRAB 14..75 CDD:214630
COG5048 170..572 CDD:227381 59/208 (28%)
C2H2 Zn finger 175..195 CDD:275368
C2H2 Zn finger 203..223 CDD:275368
C2H2 Zn finger 231..251 CDD:275368
C2H2 Zn finger 259..279 CDD:275368
C2H2 Zn finger 287..307 CDD:275368
C2H2 Zn finger 315..335 CDD:275368
C2H2 Zn finger 343..363 CDD:275368
C2H2 Zn finger 371..391 CDD:275368 10/23 (43%)
C2H2 Zn finger 399..419 CDD:275368 5/20 (25%)
C2H2 Zn finger 427..447 CDD:275368 5/21 (24%)
C2H2 Zn finger 455..475 CDD:275368 7/19 (37%)
C2H2 Zn finger 483..503 CDD:275368 8/19 (42%)
C2H2 Zn finger 511..531 CDD:275368 8/20 (40%)
C2H2 Zn finger 539..559 CDD:275368 0/19 (0%)
C2H2 Zn finger 567..587 CDD:275368 6/19 (32%)
C2H2 Zn finger 595..615 CDD:275368 6/17 (35%)
zf-H2C2_2 607..631 CDD:372612 2/5 (40%)
C2H2 Zn finger 623..643 CDD:275368
C2H2 Zn finger 651..671 CDD:275368
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 1 0.950 - 0 Normalized mean entropy S4021
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.950

Return to query results.
Submit another query.