DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG31388 and SNAI1

DIOPT Version :9

Sequence 1:NP_650060.1 Gene:CG31388 / 41355 FlyBaseID:FBgn0051388 Length:446 Species:Drosophila melanogaster
Sequence 2:NP_005976.2 Gene:SNAI1 / 6615 HGNCID:11128 Length:264 Species:Homo sapiens


Alignment Length:298 Identity:68/298 - (22%)
Similarity:111/298 - (37%) Gaps:66/298 - (22%)


- Green bases have known domain annotations that are detailed below.


  Fly   101 PDELSNLSPVLQLNDRMDFIFDPEPQDKNTDELASIK-----TTTTTEYMNAYQSVASPQS---- 156
            |:...|.|.:...|....|   .:|.|: ...||:|.     ..|.:..|..:.||.:||:    
Human    13 PNRKPNYSELQDSNPEFTF---QQPYDQ-AHLLAAIPPPEILNPTASLPMLIWDSVLAPQAQPIA 73

  Fly   157 --------SPELSTDSQLSNEHFDMGLSPESEPESEAIDNRDTSSSHTCSKCGLEFENVDELKLH 213
                    ||.::..:.||:|....|..|.|.|.........||.|...::....|..:.::...
Human    74 WASLRLQESPRVAELTSLSDEDSGKGSQPPSPPSPAPSSFSSTSVSSLEAEAYAAFPGLGQVPKQ 138

  Fly   214 KYHL---HDIPPDTKFVCDHCDEGFRSAAALTRHCNMINLPLTHSCTKCKSQFHNHILLETHKQR 275
            ...|   .|:.....|.|.:|::.:.|..||..|                        :.:|...
Human   139 LAQLSEAKDLQARKAFNCKYCNKEYLSLGALKMH------------------------IRSHTLP 179

  Fly   276 CLRPPASQHVCHICGKHLTTAFNLKNHLVRHAGTRRHKCDQCSASFYTAAELCSHQKTHTTERPY 340
            |        ||..|||..:..:.|:.|:..|.|.:...|..||.:|...:.|.:|.:||:..:.|
Human   180 C--------VCGTCGKAFSRPWLLQGHVRTHTGEKPFSCPHCSRAFADRSNLRAHLQTHSDVKKY 236

  Fly   341 ICRYNCGKTFRFCSARSMHERVHMDASKRIYQCEYCPK 378
            .|: .|.:||...|.  :|:  |.::.     |..||:
Human   237 QCQ-ACARTFSRMSL--LHK--HQESG-----CSGCPR 264

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG31388NP_650060.1 zf-AD 4..76 CDD:285071
C2H2 Zn finger 228..254 CDD:275368 6/25 (24%)
C2H2 Zn finger 286..306 CDD:275368 6/19 (32%)
C2H2 Zn finger 314..334 CDD:275368 6/19 (32%)
C2H2 Zn finger 342..363 CDD:275368 6/20 (30%)
C2H2 Zn finger 373..393 CDD:275368 3/6 (50%)
C2H2 Zn finger 401..419 CDD:275368
SNAI1NP_005976.2 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..27 3/13 (23%)
SNAG domain. /evidence=ECO:0000305|PubMed:20389281, ECO:0000305|PubMed:21300290 1..20 2/6 (33%)
Required and sufficient for interaction with KDM1A. /evidence=ECO:0000269|PubMed:20389281, ECO:0000269|PubMed:23721412 2..7
LATS2 binding 10..40 7/30 (23%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 86..115 7/28 (25%)
Destruction motif 95..100 0/4 (0%)
Required for FBXL14-triggered degradation 120..151 3/30 (10%)
Required for nuclear localization and interaction with KPNB1, NOTCH1 and PARP1. /evidence=ECO:0000269|PubMed:21577210, ECO:0000269|PubMed:22128911 151..264 36/154 (23%)
C2H2 Zn finger 156..176 CDD:275368 6/43 (14%)
C2H2 Zn finger 182..202 CDD:275368 6/19 (32%)
zf-H2C2_2 195..218 CDD:404364 7/22 (32%)
zf-C2H2 208..230 CDD:395048 6/21 (29%)
C2H2 Zn finger 210..230 CDD:275368 6/19 (32%)
C2H2 Zn finger 238..255 CDD:275368 6/21 (29%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR24390
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
11.100

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