DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG31388 and wdn

DIOPT Version :9

Sequence 1:NP_650060.1 Gene:CG31388 / 41355 FlyBaseID:FBgn0051388 Length:446 Species:Drosophila melanogaster
Sequence 2:NP_476900.1 Gene:wdn / 43398 FlyBaseID:FBgn0005642 Length:869 Species:Drosophila melanogaster


Alignment Length:567 Identity:122/567 - (21%)
Similarity:187/567 - (32%) Gaps:188/567 - (33%)


- Green bases have known domain annotations that are detailed below.


  Fly    10 RMADPAVAKNL----------------FDPSSSSVLRQIETLTNLQLKEDGKLPRFMCQDCQHDL 58
            ||.:.|.:|.|                .|...||:|| |....::...:|..|        ..||
  Fly    10 RMKEEAPSKKLPPKIYGGDAGTPTKAAHDEILSSLLR-INNFDSISSIKDESL--------DIDL 65

  Fly    59 QIAI----------------DFRRVCIE-AQELLELQLRQVEKEEEAFESLAEQWLDDCPDEL-- 104
            ...:                ||.||..| ||...||.|..                |.|.|:|  
  Fly    66 SACVTISSASLVNGNSLSSTDFWRVLDESAQNNTELNLSS----------------DVCRDDLAA 114

  Fly   105 ---SNLSPVLQLNDRMDFIFD-----PEPQDKNTD----ELASIKTTT----TTEYMNAYQSVAS 153
               |.:...|..::.....|.     |||.:..|:    :.:|..|:|    :.|.::....:..
  Fly   115 TSSSTVPSTLTSDNHSSSEFSVTFLRPEPPNAFTNSPFKKTSSSGTSTPVKLSPEQLHQQHQLQM 179

  Fly   154 PQS-----SPELST------------------------------DSQLSNEHFDM---------- 173
            |||     .|:|..                              :|:|....|.:          
  Fly   180 PQSQLLQRKPKLPAATAVRLKVFKEEPPEEKHPPEQVVTKVEVCESELLPPSFTIFQQAKSAESV 244

  Fly   174 ----GLSPESEPESEAIDNRDTSSSHTCSKC-GLEFENVDELKLHKYHLHDIPPDTKFVCDHCDE 233
                .:.|.:..|::.:: .|.:..|.|..| ||..|..||:..|:...|.:  ...:.|..|..
  Fly   245 ADAASMPPPAASETKPLE-VDPAPLHKCLDCNGLLLETPDEVAKHEAAAHRL--RLTYRCSECQR 306

  Fly   234 GFRSAAALTRHCNMINLPLTH-------------SCTKC----KSQFHNHILLETHKQRCLRPPA 281
            .|...|.|.:|..      ||             .|.||    ....|..|..:..|        
  Fly   307 EFELLAGLKKHLK------THRTEGRKDTWKKCPDCGKCLKLGSMWMHRKIHSDNKK-------- 357

  Fly   282 SQHVCHICGKHLTTAFNLKNHLVRHAGTRRHKCDQCSASFYTAAELCSHQKTHTTERPYICRYNC 346
              :.|.|||:......||.:|...|:..:.::|.:|...|...:.|..|||.|...|.|.|. .|
  Fly   358 --YQCDICGQKFVQKINLTHHARIHSSEKPYECPECQKRFQERSHLQRHQKYHAQTRSYRCE-KC 419

  Fly   347 GKTFRFCSARSMHERVHMDASKRIYQCEYCPKSYVTPSECRTHQKYHNLTRDHGCEIC------- 404
            ||.::......:|..||::  :|.:.|..|.||:::.|:.:.|...|...|...|..|       
  Fly   420 GKMYKTERCLKVHNLVHLE--QRPFACTVCDKSFISNSKLKQHSNIHTGMRPFKCNYCPRDFTNF 482

  Fly   405 -----------RISFKTAKHYRS-----HLKSNAHKTLEARAKAAAS 435
                       ::..||.:|..:     ..||..:|..:|.|.|||:
  Fly   483 PNWLKHTRRRHKVDHKTGEHLENIPSYCSKKSTTNKAQKAAAAAAAA 529

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG31388NP_650060.1 zf-AD 4..76 CDD:285071 22/98 (22%)
C2H2 Zn finger 228..254 CDD:275368 6/25 (24%)
C2H2 Zn finger 286..306 CDD:275368 7/19 (37%)
C2H2 Zn finger 314..334 CDD:275368 7/19 (37%)
C2H2 Zn finger 342..363 CDD:275368 5/20 (25%)
C2H2 Zn finger 373..393 CDD:275368 6/19 (32%)
C2H2 Zn finger 401..419 CDD:275368 5/40 (13%)
wdnNP_476900.1 C2H2 Zn finger 301..321 CDD:275368 6/25 (24%)
RPB9 333..425 CDD:224510 28/102 (27%)
C2H2 Zn finger 333..352 CDD:275368 4/18 (22%)
zf-H2C2_2 344..369 CDD:290200 7/34 (21%)
zf-C2H2 358..380 CDD:278523 7/21 (33%)
C2H2 Zn finger 360..380 CDD:275368 7/19 (37%)
zf-H2C2_2 372..395 CDD:290200 6/22 (27%)
zf-C2H2 386..408 CDD:278523 7/21 (33%)
C2H2 Zn finger 388..436 CDD:275368 15/48 (31%)
zf-H2C2_2 400..425 CDD:290200 11/25 (44%)
C2H2 Zn finger 416..433 CDD:275368 4/17 (24%)
zf-H2C2_2 429..453 CDD:290200 8/25 (32%)
C2H2 Zn finger 444..464 CDD:275368 6/19 (32%)
zf-H2C2_2 457..481 CDD:290200 5/23 (22%)
C2H2 Zn finger 472..493 CDD:275368 2/20 (10%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 1 0.950 - 0 Normalized mean entropy S4021
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
10.950

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