DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG31388 and CG6654

DIOPT Version :10

Sequence 1:NP_650060.1 Gene:CG31388 / 41355 FlyBaseID:FBgn0051388 Length:446 Species:Drosophila melanogaster
Sequence 2:NP_650429.1 Gene:CG6654 / 41831 FlyBaseID:FBgn0038301 Length:639 Species:Drosophila melanogaster


Alignment Length:620 Identity:131/620 - (21%)
Similarity:197/620 - (31%) Gaps:231/620 - (37%)


- Green bases have known domain annotations that are detailed below.


  Fly     4 ICRTCSRMADPAVAKNLFDPSSSSVLR-QIETLTNLQLKEDGKLPRFMCQDCQHDLQIAIDFRRV 67
            ||.||.....|.:  :::|..|.|.|. .|...|..:.:.:..||..:|..|..::.....|:..
  Fly     6 ICLTCLSSTGPLL--SIYDGGSGSCLADMIREFTKTKPRRNDNLPEKVCLSCLSEISNCYTFKIK 68

  Fly    68 CIEAQELLELQLRQVEKEEEAFESLAEQWLDDCPDELSNLSPVLQLNDRMDFIFDPEPQDKNTDE 132
            |              |........|....|.:.||...::|..:...|:.......|| |:.|  
  Fly    69 C--------------ENSSRTLRQLLPNALPEEPDSKVSISCPVATTDQAVQTTSWEP-DRCT-- 116

  Fly   133 LASIKT--TTTTEYMNAYQSVASPQSSPELSTDSQLSNEHFDMGLSPES---------------E 180
             ||::|  .|||:   |.|:.:..:|:..:..|.:...|.||..|..|.               :
  Fly   117 -ASVQTDAVTTTD---AEQNTSLIKSTISVDLDYEGEGEVFDYELPDEPVEKTTSLILQVQGNLK 177

  Fly   181 PESEAI--------DNRDTSSSHTCSKCGLE-FENVDE--------------------------- 209
            .|.|.:        :..|........:|.|. ||.||.                           
  Fly   178 DEKEVVFTQTNVIYEGDDHELEQQIRECNLAIFEGVDNEAEIITVTAPQVTTRKSAAKLLTQQEN 242

  Fly   210 -------------LKLHKYHL---------------HDIP------------------------- 221
                         .:|.|..:               .|:|                         
  Fly   243 DKHQTPVGSKEEARELEKEQVPQSAKRTSRRRGVVKQDVPATPPSDAEPSPKQHRLGTQRKLSAP 307

  Fly   222 -----------------PDTKFVCDHCDEGFRSAAALTRH------------CNMINLPL----- 252
                             |:.|:.||.|:.||....:|..|            ||......     
  Fly   308 RAGTVNGPSTTSGAATTPELKYHCDRCNAGFAVEKSLMIHRRQKGCINRNYKCNECEKVFVSPDH 372

  Fly   253 ---------THSCTKC------KSQFHNHILLETHKQ----RC------------LRPPASQH-- 284
                     .|:|.:|      |.....| :::.||:    :|            ||.....|  
  Fly   373 LAEHQASHGAHNCPECGIRCDSKEALSKH-MVQGHKRNLRNQCNICQKVFTMLSTLRDHMRIHTG 436

  Fly   285 ----VCHICGKHLTTAFNLKNHLVRHAGTRRHKCDQCSASFYTAAELCSHQKTHTTERPYIC--- 342
                ||:||||..|...||:.|.:||:.|:..||:.|..||.|.|||.||.:|||.::|:.|   
  Fly   437 EKPFVCNICGKSFTQNANLRQHKLRHSETKSFKCELCPHSFVTKAELTSHARTHTGDKPFECEVC 501

  Fly   343 --RYN----------------------CGKTFRFCSARSMHERVHMDASKRIYQCEYCPKSYVTP 383
              |:.                      |...|...:....|.|.|  ..:|.|.|.:|.|::...
  Fly   502 LARFTTSCSLAKHKRKHTGERPYACDLCPMRFTALNVLKNHRRTH--TGERPYVCPFCSKTFTQR 564

  Fly   384 SECRTHQKYHNLTRDHGCEICRISFKTAKHYRSHL 418
            .:|:.||:.|...|.:.|.:|...||:....||||
  Fly   565 GDCQMHQRTHQGERIYICPVCNEEFKSMPEMRSHL 599

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG31388NP_650060.1 zf-AD 4..76 CDD:462262 17/72 (24%)
C2H2 Zn finger 228..254 CDD:275368 9/51 (18%)
C2H2 Zn finger 286..306 CDD:275368 9/19 (47%)
C2H2 Zn finger 314..334 CDD:275368 10/19 (53%)
C2H2 Zn finger 342..363 CDD:275368 6/47 (13%)
C2H2 Zn finger 373..393 CDD:275368 6/19 (32%)
zf-met 401..423 CDD:463736 8/18 (44%)
C2H2 Zn finger 401..419 CDD:275368 8/18 (44%)
CG6654NP_650429.1 zf-AD 6..78 CDD:214871 18/87 (21%)
C2H2 Zn finger 331..354 CDD:275368 7/22 (32%)
COG5048 <357..570 CDD:227381 54/215 (25%)
C2H2 Zn finger 360..380 CDD:275368 2/19 (11%)
C2H2 Zn finger 385..406 CDD:275370 4/21 (19%)
C2H2 Zn finger 414..434 CDD:275368 3/19 (16%)
C2H2 Zn finger 442..490 CDD:275368 23/47 (49%)
C2H2 Zn finger 470..487 CDD:275368 9/16 (56%)
C2H2 Zn finger 498..518 CDD:275368 2/19 (11%)
C2H2 Zn finger 526..546 CDD:275368 4/19 (21%)
C2H2 Zn finger 554..574 CDD:275368 6/19 (32%)
C2H2 Zn finger 582..602 CDD:275368 8/18 (44%)

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