DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG31388 and su(Hw)

DIOPT Version :10

Sequence 1:NP_650060.1 Gene:CG31388 / 41355 FlyBaseID:FBgn0051388 Length:446 Species:Drosophila melanogaster
Sequence 2:NP_524349.1 Gene:su(Hw) / 41740 FlyBaseID:FBgn0003567 Length:941 Species:Drosophila melanogaster


Alignment Length:371 Identity:89/371 - (23%)
Similarity:126/371 - (33%) Gaps:133/371 - (35%)


- Green bases have known domain annotations that are detailed below.


  Fly   172 DMGLSPESEPESEAIDNRDTSS--------SHTCSKCGLEFENVDELKLH--------KYHLHD- 219
            |..|..:.:.:.|....:..||        .|.|.||...|..|..||.|        .|||.. 
  Fly   189 DEDLGEDGDEDGEDSSGKGNSSQTKIKEIVEHVCGKCYKTFRRVQSLKKHLEFCRYDSGYHLRKA 253

  Fly   220 -------------IPPDTKFVCDHCDEGFRSAAALTRHCNMINLP-----------------LTH 254
                         :..:.|.:|..|.|.:.     |.|...||.|                 :||
  Fly   254 DMLKNLEKIEKDAVVMEKKDICFCCSESYD-----TFHLGHINCPDCPKSFKTQTSYERHIFITH 313

  Fly   255 S------CTKCKSQFHNHILL----ETHKQRCLRPPASQHVCHICGKHLTTAF------------ 297
            |      |:.|.:...:..||    |.||.|     ...:.|.||||..|.::            
  Fly   314 SEFSDFPCSICNANLRSEALLALHEEQHKSR-----GKPYACKICGKDFTRSYHLKRHQKYSSCS 373

  Fly   298 --------------------NLKNHLVRHAGTR-----RHKCDQCSASFYTAAELCSHQKTHTTE 337
                                ||::||.:|.||:     .:.|..|...||:.:.|..|.:|||.|
  Fly   374 SNETDTMSCKVCDRVFYRLDNLRSHLKQHLGTQVVKKPEYMCHTCKNCFYSLSTLNIHIRTHTGE 438

  Fly   338 RPYICRYNCGKTFRFCSARSMHERVH--------------------------MDASKRIYQCEYC 376
            :|:.|.. |.|.|....|...|.|.|                          ....:|.::|:.|
  Fly   439 KPFDCDL-CDKKFSALVALKKHRRYHTGEKPYSCTVCNQAFAVKEVLNRHMKRHTGERPHKCDEC 502

  Fly   377 PKSYVTPSECRTHQKYHNLTRDHGCEICRISFKTAKHYRSHLKSNA 422
            .||::..::.|||.|.|  .|...||.|...|||.|....|:|:::
  Fly   503 GKSFIQATQLRTHSKTH--IRPFPCEQCDEKFKTEKQLERHVKTHS 546

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG31388NP_650060.1 zf-AD 4..76 CDD:462262
C2H2 Zn finger 228..254 CDD:275368 8/42 (19%)
C2H2 Zn finger 286..306 CDD:275368 10/51 (20%)
C2H2 Zn finger 314..334 CDD:275368 6/19 (32%)
C2H2 Zn finger 342..363 CDD:275368 7/20 (35%)
C2H2 Zn finger 373..393 CDD:275368 8/19 (42%)
zf-met 401..423 CDD:463736 9/22 (41%)
C2H2 Zn finger 401..419 CDD:275368 8/17 (47%)
su(Hw)NP_524349.1 C2H2 Zn finger 292..313 CDD:275368 1/20 (5%)
COG5048 <312..517 CDD:227381 51/210 (24%)
C2H2 Zn finger 321..341 CDD:275368 5/19 (26%)
C2H2 Zn finger 350..368 CDD:275368 6/17 (35%)
C2H2 Zn finger 382..402 CDD:275368 4/19 (21%)
C2H2 Zn finger 415..435 CDD:275368 6/19 (32%)
C2H2 Zn finger 443..463 CDD:275368 7/20 (35%)
COG5048 <467..620 CDD:227381 20/82 (24%)
C2H2 Zn finger 471..491 CDD:275368 0/19 (0%)
C2H2 Zn finger 499..519 CDD:275368 8/19 (42%)
C2H2 Zn finger 525..545 CDD:275368 9/19 (47%)
C2H2 Zn finger 555..572 CDD:275368
C2H2 Zn finger 598..615 CDD:275371
Blue background indicates that the domain is not in the aligned region.

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