DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG31388 and Zif

DIOPT Version :10

Sequence 1:NP_650060.1 Gene:CG31388 / 41355 FlyBaseID:FBgn0051388 Length:446 Species:Drosophila melanogaster
Sequence 2:NP_649657.1 Gene:Zif / 40795 FlyBaseID:FBgn0037446 Length:388 Species:Drosophila melanogaster


Alignment Length:416 Identity:79/416 - (18%)
Similarity:152/416 - (36%) Gaps:87/416 - (20%)


- Green bases have known domain annotations that are detailed below.


  Fly     5 CRTC----SRMADPAVAKNLFDPSSSSVLRQIETLTNLQLKEDGKLPRFMCQDCQHDLQIAIDFR 65
            ||.|    .|:......:...:.|.:.:|.|:..::...|.:...:|..:|:.|:.:|.:|..||
  Fly    10 CRVCLAQSERLQRLDEIREEGEESPNEMLIQLLGVSYSNLNDREHIPDGICKSCKVELNMAYQFR 74

  Fly    66 RVCIEAQELLELQLRQVE----------KEEEAFESLAEQWLDDCPDELSNLSPVLQLNDRMDFI 120
            ...:..|..:|...|::.          |||:..:       ..|.:|:..|.......:.    
  Fly    75 EKALRKQMEIEEYCRELGLLDESDVMMIKEEDGSQ-------QQCDEEMYILEETTTGEEE---- 128

  Fly   121 FDPEPQDKNTDELASIKTT-------TTTEYMNAYQSVASPQSSPELSTDSQLSNEHFDMGLSPE 178
               ..::|..:|...:.|:       .|.||:....::.......|:..:|:...|         
  Fly   129 ---HQEEKGHEEYLEVDTSDQQECIGDTIEYLEDNYTIEMNSDQTEIVLESEKQYE--------- 181

  Fly   179 SEPESEAIDNRDTSSSHTCSKCGLEFENVDELKLHKYHLHDIPPDTKFVCDHCDEGFRSAAALTR 243
             |..|:.:..::.:.:...::.|.....::.|.     ..|......::||.|...:.....:..
  Fly   182 -ETPSQQLALQEAAKASLKARRGRVRRGLNSLT-----TSDGTEKGGYICDVCGNFYEKRGRMME 240

  Fly   244 HCNMINLPLTHSCTKCKSQFHNHILLETHKQRCLRPPASQHVCHICGKHLTTAFNLKNHLVRHAG 308
            |                        ...|...|      |:.|.:|.........|:.|:..|.|
  Fly   241 H------------------------RRRHDGIC------QYACELCDAKFQVREQLRKHMYSHTG 275

  Fly   309 TRRHKCDQCSASFYTAAELCSHQKTHTTERPYICRYNCGKTFRFCSARSMHERVHMDASKRIYQC 373
            ::.:||..||..|:..:.|.||:..|...:||:|:. |.|.|.:..:.:.||.:|.|.  ::|:|
  Fly   276 SKPYKCSFCSRQFFYESVLKSHENVHRGIKPYVCKV-CDKAFAYAHSLTKHELIHSDI--KLYRC 337

  Fly   374 EYCPKSYVTPSECRTHQKYHNLTRDH 399
            :||.|.:    ....|.:.|..|:.|
  Fly   338 DYCNKDF----RLLHHMRQHEETKLH 359

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG31388NP_650060.1 zf-AD 4..76 CDD:462262 16/74 (22%)
C2H2 Zn finger 228..254 CDD:275368 4/25 (16%)
C2H2 Zn finger 286..306 CDD:275368 4/19 (21%)
C2H2 Zn finger 314..334 CDD:275368 7/19 (37%)
C2H2 Zn finger 342..363 CDD:275368 6/20 (30%)
C2H2 Zn finger 373..393 CDD:275368 5/19 (26%)
zf-met 401..423 CDD:463736
C2H2 Zn finger 401..419 CDD:275368
ZifNP_649657.1 zf-AD 9..87 CDD:462262 17/76 (22%)
C2H2 Zn finger 225..245 CDD:275368 4/43 (9%)
COG5048 <250..369 CDD:227381 35/117 (30%)
C2H2 Zn finger 253..273 CDD:275368 4/19 (21%)
C2H2 Zn finger 281..301 CDD:275368 7/19 (37%)
C2H2 Zn finger 309..329 CDD:275368 6/20 (30%)
C2H2 Zn finger 337..353 CDD:275368 5/19 (26%)
Blue background indicates that the domain is not in the aligned region.

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