DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG31388 and CG17568

DIOPT Version :9

Sequence 1:NP_650060.1 Gene:CG31388 / 41355 FlyBaseID:FBgn0051388 Length:446 Species:Drosophila melanogaster
Sequence 2:NP_609951.2 Gene:CG17568 / 35198 FlyBaseID:FBgn0032763 Length:513 Species:Drosophila melanogaster


Alignment Length:536 Identity:120/536 - (22%)
Similarity:201/536 - (37%) Gaps:171/536 - (31%)


- Green bases have known domain annotations that are detailed below.


  Fly     5 CRTCSRMADPA---VAKNLFDPSSSS----VLRQIETLTNLQLKEDGKLPRFMCQDCQHDLQIAI 62
            ||.|::  |.|   |...:.:.|..:    ::..|.....:|::.:.:|...:|.:|...:...|
  Fly    11 CRLCAK--DDAHGNVKVQMNENSQGNWDNVLIMAIRKYFEVQMQLEDELSSVLCTECYTLISELI 73

  Fly    63 DFRRVCIEAQELLELQLRQVEK--EEEAFESLAEQWLDDCPDELSN-LSPVLQLNDRMDFIFDPE 124
            ||.....:.|::.|: ||:.|.  ::|...:...|....|.|:.:: :.|:..|....|.::...
  Fly    74 DFAEHVTKVQDIFEV-LRRTETDGDQEMDVAALRQQFGLCDDDWTHIIKPIPALEMESDNVYQKP 137

  Fly   125 PQ--------DKNTDELASIKTTTTTEYMNAYQSVAS---------------PQSSPELSTD--- 163
            .:        :.::.|:...|.||||..:...::|..               .:::.:|..:   
  Fly   138 AELLKDFPLAETSSQEMEISKRTTTTHLIQTKKNVEMEIPKQEFIDLGPILLEKNTSQLDMEDVL 202

  Fly   164 -----SQLSNEHFDMGLSP---ESEPESEAIDNRD------------------TSSSHT------ 196
                 .:||....|...||   |::.:||.:|:.:                  .::.:|      
  Fly   203 DELPQEELSQPRLDSTTSPASMENDVKSEMLDSCEGDDDFLPVDGQLMDLVAVATTPNTLESTAE 267

  Fly   197 ---------CSKCGLEFEN--------------------VDE-----------------LKLHKY 215
                     |.|||..:.|                    ||:                 |||||.
  Fly   268 EKAKRGRMDCEKCGKVYRNRASYEKHLERECRRIERRVKVDKTTTTCDICNKTLSSATALKLHKE 332

  Fly   216 HLH-DIPPDTKFVCDHCDEGFRSAAALTRHCNMINLPLTHS------CTKCKSQFHNHILLETHK 273
            .:| ::.|   ::||.|.:..::..||..|      .|.|:      ||.||:.|.|...|:.|.
  Fly   333 GIHQNVKP---YICDSCGKQLKTITALNEH------KLVHTESRPFECTVCKAGFKNRARLKAHY 388

  Fly   274 QRCLRPPASQHVCHICGKHLTTAFNLKNHLVRHAGTRRHKCDQCSASFYTAAELCSHQKTHTTER 338
            |....|   ..||:||||.|.|......|.|.|...||.|||.|.|.|..:..|.:|..:||..|
  Fly   389 QIHAEP---SFVCNICGKKLQTRRTWNMHKVVHTEERRLKCDVCGALFKRSKTLKTHLLSHTGLR 450

  Fly   339 PYICRYNCGKTFRFCSARSMHERVHMDASKRIYQCEYCPKSYVTPSECRTHQ-KYH--NLTRDHG 400
            ||:|.| |||:|. |:|                             .||:|: |.|  .:.::.|
  Fly   451 PYVCNY-CGKSFA-CNA-----------------------------NCRSHKLKKHPQEVQQEDG 484

  Fly   401 CEI-CRISFKTAKHYR 415
            ..: .|::..|....|
  Fly   485 ARLPSRLNVPTLDELR 500

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG31388NP_650060.1 zf-AD 4..76 CDD:285071 16/77 (21%)
C2H2 Zn finger 228..254 CDD:275368 7/25 (28%)
C2H2 Zn finger 286..306 CDD:275368 9/19 (47%)
C2H2 Zn finger 314..334 CDD:275368 7/19 (37%)
C2H2 Zn finger 342..363 CDD:275368 8/20 (40%)
C2H2 Zn finger 373..393 CDD:275368 4/20 (20%)
C2H2 Zn finger 401..419 CDD:275368 3/16 (19%)
CG17568NP_609951.2 zf-AD 10..87 CDD:214871 16/77 (21%)
COG5048 <313..471 CDD:227381 61/200 (31%)
C2H2 Zn finger 314..335 CDD:275368 5/20 (25%)
C2H2 Zn finger 343..363 CDD:275368 7/25 (28%)
C2H2 Zn finger 371..391 CDD:275368 9/19 (47%)
C2H2 Zn finger 398..418 CDD:275368 9/19 (47%)
C2H2 Zn finger 426..446 CDD:275368 7/19 (37%)
zf-H2C2_2 439..463 CDD:290200 13/25 (52%)
C2H2 Zn finger 454..475 CDD:275368 12/51 (24%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 84 1.000 Inparanoid score I1804
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR24390
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
22.150

Return to query results.
Submit another query.