DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG31388 and prg

DIOPT Version :9

Sequence 1:NP_650060.1 Gene:CG31388 / 41355 FlyBaseID:FBgn0051388 Length:446 Species:Drosophila melanogaster
Sequence 2:NP_001260253.1 Gene:prg / 34177 FlyBaseID:FBgn0285971 Length:558 Species:Drosophila melanogaster


Alignment Length:517 Identity:110/517 - (21%)
Similarity:191/517 - (36%) Gaps:111/517 - (21%)


- Green bases have known domain annotations that are detailed below.


  Fly     5 CRTCSRMADPAVAKNLFDPS-----SSSVLRQIETLTNLQLKEDGKLPRFMCQDCQHDLQIAIDF 64
            ||.|....||. :.|:||.:     ..|:....::|.::|...:..|...:|..|...|:.|.:.
  Fly    17 CRLCHHNTDPN-SLNIFDDTVQFCKDVSIAEVSKSLWSVQYDRNECLSELICSRCLEILEEAFEL 80

  Fly    65 RRVCIEAQELLELQLRQVEKE----------------------------EEAFESLAEQW----- 96
            |:...|.::.|:.||:::.|:                            |...||..|::     
  Fly    81 RKGMQEREQSLQEQLKEMIKDHPKHRPGLNGNPGVFVPEEGCIIVEVDPENLAESSEEEFALGSD 145

  Fly    97 -----LDDCPDELSNLSPVLQLNDRMDFIFDPEPQDKNTDELASIKTTTTTEYMNAYQSVASPQS 156
                 .||..:|           :..|:..:.|...:|.::: .:........|.|.||||:..:
  Fly   146 GEYENYDDDDEE-----------EEEDYDEEDEEDGQNGEDV-DMPLGMDAAQMAAQQSVANNAN 198

  Fly   157 SPELSTDSQLSNEHFDMGLSPESEPESEAIDNRDTSSSHTCSKCGLEFENVDELKLHKYHLHDIP 221
            :.|.........::.|:|.:..:|.:...:...|.::.:.|:.|.::......|..|...|||  
  Fly   199 TTEARPKRAFLCQYCDLGFTLPAECQEHELAAHDPNAPYCCNFCNIKLVTRPALISHIKTLHD-- 261

  Fly   222 PDTKFVCDHCDEGFRSAAALTRHCNMINLPLTHSCTKCKSQFHNHILLETHKQRCLRPPASQHVC 286
            ||..:||.||.:||...:.|.:|..:.......:|..|...|..:..|..|.:  :.......||
  Fly   262 PDRPYVCAHCRKGFVRRSDLKKHTIVHTGVRPFTCNVCSKSFSRNTNLTKHMR--IHSGVKPFVC 324

  Fly   287 HICGKHLTTAFNLKNHLVRHAGTRRHKCDQCSASFYTAAELCSHQKTHT---------------- 335
            ..|.:...||..:..|...|...:..:|.:|..||....:|.:||:.||                
  Fly   325 QQCPRSFQTAVEMMRHTRSHGEVKAFQCGRCPYSFSRRDKLIAHQQVHTRRDMEQQQQMGLIPPM 389

  Fly   336 --------------------TERPYICRYNCGKTFRFCSARSMHERVHMDASKRIYQCEYCPKSY 380
                                ..|.|.|.. |.:||:.......|:.:|||:   ::.|:.|.:.:
  Fly   390 EGDLQQQALQAKQKAAAQTKNSRYYHCDV-CDRTFQRERDLQRHQALHMDS---LFACKTCNQGF 450

  Fly   381 VTPSECRTHQKYHNLTRDHG----CEICRISFKTAKHYRSHLKSN--AHKTLEARAKAAASP 436
            ....:.:.|:     ...||    |.||.|||.......:|||.:  .||..:...:||..|
  Fly   451 NRREQLQRHE-----LEAHGPSFTCGICCISFLHQIELENHLKVHQLQHKMAQRAQEAAILP 507

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG31388NP_650060.1 zf-AD 4..76 CDD:285071 18/75 (24%)
C2H2 Zn finger 228..254 CDD:275368 7/25 (28%)
C2H2 Zn finger 286..306 CDD:275368 5/19 (26%)
C2H2 Zn finger 314..334 CDD:275368 7/19 (37%)
C2H2 Zn finger 342..363 CDD:275368 5/20 (25%)
C2H2 Zn finger 373..393 CDD:275368 3/19 (16%)
C2H2 Zn finger 401..419 CDD:275368 7/17 (41%)
prgNP_001260253.1 zf-AD 16..94 CDD:285071 19/77 (25%)
COG5048 <212..340 CDD:227381 31/131 (24%)
C2H2 Zn finger 239..260 CDD:275368 4/20 (20%)
C2H2 Zn finger 268..288 CDD:275368 7/19 (37%)
zf-H2C2_2 280..305 CDD:290200 5/24 (21%)
zf-C2H2 294..316 CDD:278523 5/23 (22%)
C2H2 Zn finger 296..316 CDD:275368 5/21 (24%)
zf-H2C2_2 308..331 CDD:290200 5/24 (21%)
C2H2 Zn finger 324..344 CDD:275368 5/19 (26%)
C2H2 Zn finger 352..372 CDD:275368 7/19 (37%)
C2H2 Zn finger 416..436 CDD:275368 5/20 (25%)
C2H2 Zn finger 443..464 CDD:275368 3/25 (12%)
C2H2 Zn finger 470..490 CDD:275368 9/19 (47%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45439351
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
10.930

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