DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG31388 and LOC1278771

DIOPT Version :10

Sequence 1:NP_650060.1 Gene:CG31388 / 41355 FlyBaseID:FBgn0051388 Length:446 Species:Drosophila melanogaster
Sequence 2:XP_318400.3 Gene:LOC1278771 / 1278771 VectorBaseID:AGAMI1_001625 Length:277 Species:Anopheles gambiae


Alignment Length:301 Identity:65/301 - (21%)
Similarity:105/301 - (34%) Gaps:62/301 - (20%)


- Green bases have known domain annotations that are detailed below.


  Fly   145 MNAYQSVASPQSSPE---------------LSTDSQLSNE-HFDMGLSPESEPESEAIDNRDTSS 193
            |....::..|.:.||               .:|:..|.|: |  .|.|..:|...:..:..:...
Mosquito     1 MELLTTMKIPTAGPETYCRLCLGKESLLGVFATEKPLHNDGH--TGSSSSTELVEKIYECTNIKL 63

  Fly   194 SHT-------CSKCGLEFENVDELKLHKYHLHDIPPDTKFVCDHCDE--GFRSAAALTRHCNMIN 249
            |.|       |.:|....::....::....::|:...|..|.:..|:  |..:.|...|....:.
Mosquito    64 SCTVDAGCAICRRCLQAVQDFYHFRVRSNKVNDLIQVTTVVANGDDDNSGSGNEAPAKRETTTVV 128

  Fly   250 LPLTHSCTKCKSQFHNHILLETHKQRCLRPPASQHVCHICGKHLTTAFNLKNHLVRHAGTRRHKC 314
            :|...:.|.          |...||   :|..|                :.:...:..|.|.::|
Mosquito   129 VPCPTTTTP----------LPAAKQ---QPKPS----------------IVSSASKTTGERSNRC 164

  Fly   315 DQCSASFYTAAELCSH-QKTHTTERPYICRYNCGKTFRFCS--ARSMHERVHMDASKRIYQCEYC 376
            ..|..||.|.|||..| ::||...|.:.|. ||...|:...  ||.|..|.....||  |:|..|
Mosquito   165 RYCPKSFRTVAELAEHGKRTHVAGRQHHCP-NCLAQFQHAPSLARHMRSRSCFAFSK--YRCRVC 226

  Fly   377 PKSYVTPSECRTHQKYHNLTRDHGCEICRISFKTAKHYRSH 417
            .:|:....:...|.:.|.....:.|..|...||.....|.|
Mosquito   227 SESFPERDQWADHIRIHAKDFPYQCPDCWSQFKHKATLRRH 267

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG31388NP_650060.1 zf-AD 4..76 CDD:462262
C2H2 Zn finger 228..254 CDD:275368 5/27 (19%)
C2H2 Zn finger 286..306 CDD:275368 0/19 (0%)
C2H2 Zn finger 314..334 CDD:275368 9/20 (45%)
C2H2 Zn finger 342..363 CDD:275368 8/22 (36%)
C2H2 Zn finger 373..393 CDD:275368 4/19 (21%)
zf-met 401..423 CDD:463736 6/17 (35%)
C2H2 Zn finger 401..419 CDD:275368 6/17 (35%)
LOC1278771XP_318400.3 None
Blue background indicates that the domain is not in the aligned region.

Return to query results.
Submit another query.