DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG31388 and LOC116407549

DIOPT Version :10

Sequence 1:NP_650060.1 Gene:CG31388 / 41355 FlyBaseID:FBgn0051388 Length:446 Species:Drosophila melanogaster
Sequence 2:XP_031748851.1 Gene:LOC116407549 / 116407549 XenbaseID:XB-GENE-29092675 Length:901 Species:Xenopus tropicalis


Alignment Length:462 Identity:109/462 - (23%)
Similarity:157/462 - (33%) Gaps:114/462 - (24%)


- Green bases have known domain annotations that are detailed below.


  Fly     3 YICRTCSRMADPAVAKNLFDPSSSSVLRQIETLTNLQLKEDGKLPRFMCQDCQHDLQIAIDFRRV 67
            |.|.||.:.         |...||        |........|..| :.|.||..    :..:|..
 Frog   478 YPCSTCGKR---------FTSRSS--------LGEHYRSHSGNRP-YSCSDCGK----SFTYRSK 520

  Fly    68 CIEAQELLELQLRQVEKEEEAFESLAEQWLDDCPDELSNLSPVLQLNDRMDFIFDPEPQDKNTDE 132
            .:..|        ::..:|:.|.      .::|....|         .|..|:       |:...
 Frog   521 LVRHQ--------RIHTKEKPFS------CNECGKSFS---------QRSGFV-------KHYQT 555

  Fly   133 LASIKTTTTTEYMNAYQSVASPQSSPELSTDSQLSNEHFDMGLSPESEPESEAIDNRDT------ 191
            .|.||..:..|...::.         :.|:.::....|  ||:.|.|.||......:.|      
 Frog   556 HAGIKPYSCRECGKSFM---------QSSSFTKHCQSH--MGVKPYSCPECGKCFAQYTRYVLHQ 609

  Fly   192 -----SSSHTCSKCGLEFENVDELKLH-KYHLHDIPPDTKFVCDHCDEGFRSAAALTRHCNMINL 250
                 ....|||:||..|.|...|..| |.|....|    |.|..|.:.|.:.:.|.||..:.:.
 Frog   610 RIHTGEKPFTCSECGKCFINRAYLLRHRKIHTGVRP----FSCPECAKCFINNSQLNRHLLIHSE 670

  Fly   251 PLTHSCTKC----KSQFHNHILLETHKQRCLRPPA--------SQ----------HV------CH 287
            ....||.:|    |.:.|..:.|..||..  :|.|        ||          ||      |.
 Frog   671 ERPFSCPECGKLFKRRTHLDVHLSVHKAE--KPFACTECGKSFSQRSGFVKHYQTHVGIKPYSCR 733

  Fly   288 ICGKHLTTAFNLKNHLVRHAGTRRHKCDQCSASFYTAAELCSHQKTHTTERPYICRYNCGKTFRF 352
            .|||..|.:.:...|...|.|.:.:.|.:|...|........||:.||.|:|:.|. .|||.|..
 Frog   734 ECGKSFTQSSSFTKHCQSHVGAKPYSCPECGKCFAQYTRYVLHQRIHTGEKPFTCS-ECGKCFIN 797

  Fly   353 CSARSMHERVHMDASKRIYQCEYCPKSYVTPSECRTHQKYHNLTRDHGCEICRISFKTAKHYRSH 417
            .:....|.::|  ...|.:.|..|.|.::..|:...|...|:..|...|..|...||...|...|
 Frog   798 RTYLLRHRKIH--TGVRPFSCPECAKCFIDNSQLNRHLLIHSEERPFSCPECGKLFKRRTHLDVH 860

  Fly   418 LKSNAHK 424
            |  ..||
 Frog   861 L--TVHK 865

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG31388NP_650060.1 zf-AD 4..76 CDD:462262 14/71 (20%)
C2H2 Zn finger 228..254 CDD:275368 6/25 (24%)
C2H2 Zn finger 286..306 CDD:275368 6/19 (32%)
C2H2 Zn finger 314..334 CDD:275368 5/19 (26%)
C2H2 Zn finger 342..363 CDD:275368 6/20 (30%)
C2H2 Zn finger 373..393 CDD:275368 5/19 (26%)
zf-met 401..423 CDD:463736 7/21 (33%)
C2H2 Zn finger 401..419 CDD:275368 6/17 (35%)
LOC116407549XP_031748851.1 KRAB_A-box 88..>117 CDD:470626
COG5048 433..888 CDD:227381 109/462 (24%)
C2H2 Zn finger 452..472 CDD:275368
C2H2 Zn finger 480..500 CDD:275368 7/36 (19%)
C2H2 Zn finger 508..528 CDD:275368 5/31 (16%)
C2H2 Zn finger 536..556 CDD:275368 5/35 (14%)
C2H2 Zn finger 564..580 CDD:275368 2/24 (8%)
C2H2 Zn finger 592..612 CDD:275368 3/19 (16%)
C2H2 Zn finger 620..640 CDD:275368 9/19 (47%)
C2H2 Zn finger 648..668 CDD:275368 6/19 (32%)
C2H2 Zn finger 676..696 CDD:275368 5/19 (26%)
C2H2 Zn finger 704..724 CDD:275368 2/19 (11%)
C2H2 Zn finger 732..752 CDD:275368 6/19 (32%)
C2H2 Zn finger 760..780 CDD:275368 5/19 (26%)
C2H2 Zn finger 788..808 CDD:275368 6/20 (30%)
C2H2 Zn finger 816..836 CDD:275368 5/19 (26%)
C2H2 Zn finger 844..864 CDD:275368 7/21 (33%)
C2H2 Zn finger 872..892 CDD:275368
Blue background indicates that the domain is not in the aligned region.

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