DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG31388 and znf853

DIOPT Version :10

Sequence 1:NP_650060.1 Gene:CG31388 / 41355 FlyBaseID:FBgn0051388 Length:446 Species:Drosophila melanogaster
Sequence 2:XP_031748869.1 Gene:znf853 / 100487314 XenbaseID:XB-GENE-6031115 Length:604 Species:Xenopus tropicalis


Alignment Length:479 Identity:118/479 - (24%)
Similarity:180/479 - (37%) Gaps:138/479 - (28%)


- Green bases have known domain annotations that are detailed below.


  Fly    32 IETLTNLQLKEDGKLPRFMCQDCQHDLQIAIDFRRVCIEAQELL---ELQLRQVEKEEE------ 87
            :|.::|:.....|:: ...|:|      ::|.|   .:|..|.:   :..||::.||||      
 Frog    96 LELISNIIQLLTGEV-AIRCED------VSIYF---SLEEWEYIKGNQALLRKIMKEEEEPQQVC 150

  Fly    88 ----AFESLAE--------------------QWLDDCPD-ELSN--LSPVLQLNDRMDFIFDPEP 125
                .:|...|                    :..|.|.| ||.|  :||..|          |.|
 Frog   151 PPDGEYEDKREIPADLGGTLCYNNEPSKIGAEGADFCVDGELRNPEISPAEQ----------PPP 205

  Fly   126 QDKNTDELAS----------IK-TTTTTEYMNA---------YQSVA--SPQSSPELSTDSQLS- 167
            .:...:|.||          |: |.|.|..|..         |:||.  ..:||.|....|..| 
 Frog   206 ANGIKEEAASDCSINPLTEQIQGTDTPTPIMGCSLNNNSAEDYRSVVIKEEESSSEGENQSDCSI 270

  Fly   168 NEHFDMGLSPESEPE----SEAIDNRDTSS-------SHT------CSKCGLEFENVDELKLHK- 214
            |.......:|....|    ||......|.:       :||      ||.|...|:...:|.||| 
 Frog   271 NSQIQGTDTPTPNTETYNCSECHKRCKTKAGFLKHQKTHTGVKPFVCSVCEKPFKYQSKLNLHKR 335

  Fly   215 YHLHDIPPDTKFVCDHCDEGFRSAAALTRHCNMINLPLTH------SCTKC------KSQFHNHI 267
            .|..:.|    |.|..|.:.|      |||.::|....||      ||:.|      .|.|:.|.
 Frog   336 SHTGEKP----FSCSECGKRF------TRHVHLIEHHRTHTGEKPYSCSDCGKHFSHSSDFYRHC 390

  Fly   268 LLETHKQRCLRPPASQHVCHICGKHLTTAFNLKNHLVRHAGTRRHKCDQCSASFYTAAELCSHQK 332
            .:...::.|        :|..|.|..|:...|..|...|.|..::.|.:|...|.:.::|..|.:
 Frog   391 RIHRLEKLC--------ICSQCNKQFTSHSELIVHQSSHVGRGQYPCSECGKHFVSTSQLKIHLR 447

  Fly   333 THTTERPYICRYNCGKTFRFCSARSMHERVHMDASKRIYQCEYCPKSYVTPSECRTHQKYHNLTR 397
            .|:.||||.|. .|||.|::.|..::|:|:|  ..::.:.|..|.|.::..:...:|:|.|...:
 Frog   448 VHSVERPYSCS-ECGKCFKYSSYLTVHKRIH--TGEKPFTCTECGKGFIDRAYLNSHKKIHTGKK 509

  Fly   398 DHGCEIC--------RISFKTAKH 413
            ...|..|        |:.|.|..|
 Frog   510 PFTCTECGKCFSEGSRLKFHTRIH 533

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG31388NP_650060.1 zf-AD 4..76 CDD:462262 9/46 (20%)
C2H2 Zn finger 228..254 CDD:275368 7/25 (28%)
C2H2 Zn finger 286..306 CDD:275368 6/19 (32%)
C2H2 Zn finger 314..334 CDD:275368 5/19 (26%)
C2H2 Zn finger 342..363 CDD:275368 8/20 (40%)
C2H2 Zn finger 373..393 CDD:275368 5/19 (26%)
zf-met 401..423 CDD:463736 6/21 (29%)
C2H2 Zn finger 401..419 CDD:275368 6/21 (29%)
znf853XP_031748869.1 KRAB_A-box 112..145 CDD:470626 11/41 (27%)
COG5048 <265..502 CDD:227381 67/257 (26%)
C2H2 Zn finger 289..309 CDD:275368 3/19 (16%)
C2H2 Zn finger 317..337 CDD:275368 8/19 (42%)
C2H2 Zn finger 345..365 CDD:275368 7/25 (28%)
C2H2 Zn finger 373..393 CDD:275368 5/19 (26%)
C2H2 Zn finger 401..421 CDD:275368 6/19 (32%)
C2H2 Zn finger 429..449 CDD:275368 5/19 (26%)
C2H2 Zn finger 457..477 CDD:275368 8/20 (40%)
C2H2 Zn finger 485..505 CDD:275368 5/19 (26%)
zf-H2C2_2 497..521 CDD:463886 5/23 (22%)
C2H2 Zn finger 513..533 CDD:275368 5/19 (26%)
zf-H2C2_2 525..550 CDD:463886 4/9 (44%)
C2H2 Zn finger 541..561 CDD:275368
zf-H2C2_2 553..576 CDD:463886
C2H2 Zn finger 569..589 CDD:275368
Blue background indicates that the domain is not in the aligned region.

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