DRSC/TRiP Functional Genomics Resources

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Protein Alignment Arfip and Arfip1

DIOPT Version :9

Sequence 1:NP_650058.1 Gene:Arfip / 41353 FlyBaseID:FBgn0037884 Length:355 Species:Drosophila melanogaster
Sequence 2:XP_006232601.1 Gene:Arfip1 / 60382 RGDID:708401 Length:373 Species:Rattus norvegicus


Alignment Length:365 Identity:161/365 - (44%)
Similarity:225/365 - (61%) Gaps:52/365 - (14%)


- Green bases have known domain annotations that are detailed below.


  Fly    33 SGILGSAS--------SHSIAGGGG---------GGGNVGVGV---GGPFGAPSSLPLRNHSAPT 77
            :|.:|.|.        .||:..|.|         |..:...||   |...|:         |||.
  Rat    18 NGEVGDAHEHGYNRDLKHSLPSGLGLSETQITSHGFDSTKEGVTEAGASQGS---------SAPP 73

  Fly    78 TP--MSPS--------------SPPSGNGILSPTDSG----SGSIIRTSASKIDSLKNWSISTYK 122
            .|  :|||              :.|:| |..:.|..|    :..|...:..|::.::.||::|||
  Rat    74 LPCVLSPSRVAASQLTQHAGDLTVPAG-GQRTHTKGGPVILADEIKNPAMEKLELVRKWSLNTYK 137

  Fly   123 CTRQIMLEKLGKSQRTVDSELEAQIEQLRETQRKYLSILRLTRAFSSHFQHVVVTQHALADSFAD 187
            |||||:.||||:..||||.||||||:.||:.::||.:||:|.:..|:....:|.||..|.|:|||
  Rat   138 CTRQIISEKLGRGSRTVDLELEAQIDILRDNKKKYENILKLAQTLSTQLFQMVHTQKQLGDAFAD 202

  Fly   188 LAQKNPELQKEFTCNSETQRNLTKNGELLLNALNFFISSVNTLCNKTIDDTLLTIRQYETARIEF 252
            |:.|:.||.:||..|::||:.|.||||.||.|:||||:|||||.||||:|||:|::|||.||||:
  Rat   203 LSLKSLELHEEFGYNADTQKLLAKNGETLLGAINFFIASVNTLVNKTIEDTLMTVKQYENARIEY 267

  Fly   253 DAYRMDLE--NTKPELTPSAVALEETQRSYAQHKEQYEKLRSDVAVKMQFLDENRIKVMHKQLIL 315
            ||||.|||  |..|....:...:|::|..:..|||:|:|:||||:||::||:||::||:..||.|
  Rat   268 DAYRTDLEELNLGPRDANTLPKIEQSQHLFQIHKEKYDKMRSDVSVKLKFLEENKVKVLRNQLAL 332

  Fly   316 LHNAIAAYFSGNAMALESTLKQFNIKLKSPNAVTGSWLEQ 355
            .|:|:||||:||...||.|||||::|||:|.....||||:
  Rat   333 FHSAVAAYFAGNQKQLEQTLKQFHVKLKTPGVDAPSWLEE 372

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ArfipNP_650058.1 BAR_Arfaptin 140..338 CDD:153344 108/199 (54%)
Arfip1XP_006232601.1 BAR_Arfaptin 155..355 CDD:153344 108/199 (54%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C166335313
Domainoid 1 1.000 267 1.000 Domainoid score I1799
eggNOG 00.000 Not matched by this tool.
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 305 1.000 Inparanoid score I2558
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1179170at2759
OrthoFinder 1 1.000 - - FOG0003325
OrthoInspector 1 1.000 - - otm46197
orthoMCL 1 0.900 - - OOG6_105484
Panther 1 1.100 - - O PTHR12141
Phylome 1 0.910 - -
SonicParanoid 1 1.000 - - X2693
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
1211.900

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