DRSC/TRiP Functional Genomics Resources

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Protein Alignment Arfip and arfip2b

DIOPT Version :9

Sequence 1:NP_650058.1 Gene:Arfip / 41353 FlyBaseID:FBgn0037884 Length:355 Species:Drosophila melanogaster
Sequence 2:XP_005155430.1 Gene:arfip2b / 550342 ZFINID:ZDB-GENE-050417-131 Length:395 Species:Danio rerio


Alignment Length:371 Identity:171/371 - (46%)
Similarity:231/371 - (62%) Gaps:49/371 - (13%)


- Green bases have known domain annotations that are detailed below.


  Fly     6 RSIHEMLKDAPSLNDSCGAVHTGTEGGSGILGSASSHSIAGGGGGGGNVGVGVGGPFGAPSSLPL 70
            |.:.:::...|:||::                     ||..||.||...|:   .|..:...|.:
Zfish    52 RDLQQVMVSGPNLNET---------------------SIVSGGYGGTTEGI---IPTSSIKDLRM 92

  Fly    71 RNHSAPTTPMSPSSPPSGNGILSPTDS------------GSGSIIR-------TSASKIDSLKNW 116
            ::......|    |..:...|.|.:|.            ||.|.:.       .:..|.|.:|.|
Zfish    93 KSRGVSIAP----SQIAACRIASQSDDILCIPGSNMDYVGSNSSMAAEEATRGVAVEKFDIMKKW 153

  Fly   117 SISTYKCTRQIMLEKLGKSQRTVDSELEAQIEQLRETQRKYLSILRLTRAFSSHFQHVVVTQHAL 181
            .::|||||:|::.|:.|:..||||.|||||||.||||:|||.::|||.||.::||..:|.|||||
Zfish   154 GLNTYKCTKQMISERFGRGSRTVDLELEAQIEVLRETKRKYENVLRLARALTNHFYSMVQTQHAL 218

  Fly   182 ADSFADLAQKNPELQKEFTCNSETQRNLTKNGELLLNALNFFISSVNTLCNKTIDDTLLTIRQYE 246
            .|:||||:||:|||:.||..|:|||:.|.||||.||.|:|||:||:|||.|||::|||:||:.||
Zfish   219 GDTFADLSQKSPELRDEFGYNAETQKLLCKNGETLLGAINFFVSSINTLVNKTMEDTLMTIKMYE 283

  Fly   247 TARIEFDAYRMDLE--NTKPELTPSAVALEETQRSYAQHKEQYEKLRSDVAVKMQFLDENRIKVM 309
            .||:||||||.|||  |..|....:...:|..|:.|..||::||:|||||.:|::||:||::|||
Zfish   284 NARLEFDAYRADLEELNMGPRDAVTMARIEAAQQQYQIHKDKYERLRSDVTIKIKFLEENKVKVM 348

  Fly   310 HKQLILLHNAIAAYFSGNAMALESTLKQFNIKLKSPNAVTGSWLEQ 355
            ||||:|.||||:|||:||...||.||||||||||.|.|...||||:
Zfish   349 HKQLLLFHNAISAYFAGNQQQLEQTLKQFNIKLKPPGADKPSWLEE 394

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ArfipNP_650058.1 BAR_Arfaptin 140..338 CDD:153344 122/199 (61%)
arfip2bXP_005155430.1 BAR_Arfaptin 177..377 CDD:153344 122/199 (61%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C170574618
Domainoid 1 1.000 277 1.000 Domainoid score I1689
eggNOG 00.000 Not matched by this tool.
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H8234
Inparanoid 1 1.050 314 1.000 Inparanoid score I2546
OMA 1 1.010 - - QHG48818
OrthoDB 1 1.010 - - D1179170at2759
OrthoFinder 1 1.000 - - FOG0003325
OrthoInspector 1 1.000 - - otm25606
orthoMCL 1 0.900 - - OOG6_105484
Panther 1 1.100 - - LDO PTHR12141
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R5434
SonicParanoid 1 1.000 - - X2693
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
1514.940

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