DRSC/TRiP Functional Genomics Resources

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Protein Alignment Arfip and arfip1

DIOPT Version :9

Sequence 1:NP_650058.1 Gene:Arfip / 41353 FlyBaseID:FBgn0037884 Length:355 Species:Drosophila melanogaster
Sequence 2:XP_012816839.2 Gene:arfip1 / 496949 XenbaseID:XB-GENE-951005 Length:397 Species:Xenopus tropicalis


Alignment Length:389 Identity:163/389 - (41%)
Similarity:234/389 - (60%) Gaps:59/389 - (15%)


- Green bases have known domain annotations that are detailed below.


  Fly    11 MLKDAPSLNDSCGAVHTGTEGGSGILGSASSH---------SIAGG-----------GGGGGNVG 55
            |.:|:|  ......:|..:   :|.:.:.|.|         ||:.|           |......|
 Frog    23 MAQDSP--RSEVAEIHVTS---NGEVDNTSEHNFNLNDLKRSISAGLGLSETQMTSHGIDSTTEG 82

  Fly    56 VGVGGPFGAPSSLPLRNHSAPTTPMSPSSPPS----------GNGILSP------TDSGSGSII- 103
            :...|||          ..:.|||..|...||          |:.|:.|      |...||.:: 
 Frog    83 IIESGPF----------QGSFTTPRYPVISPSSAAASRLADQGDDIIVPPAEQQRTQQTSGPVVL 137

  Fly   104 -----RTSASKIDSLKNWSISTYKCTRQIMLEKLGKSQRTVDSELEAQIEQLRETQRKYLSILRL 163
                 .|:..|.:.::.||::||||||||:.||||:..:|||.|||:|||.||:.::||.::|:|
 Frog   138 AEEPRSTAVEKFELVRKWSLNTYKCTRQILSEKLGRGSKTVDLELESQIEILRDNKKKYENVLKL 202

  Fly   164 TRAFSSHFQHVVVTQHALADSFADLAQKNPELQKEFTCNSETQRNLTKNGELLLNALNFFISSVN 228
            .:..|:....:|.||..|.|:||||:.|:.||.:||..|::||:.|.||||.||.|:|||||.||
 Frog   203 AQTLSTQLFQMVQTQRQLGDAFADLSLKSLELHEEFGYNADTQKLLAKNGETLLGAMNFFISGVN 267

  Fly   229 TLCNKTIDDTLLTIRQYETARIEFDAYRMDLE--NTKPELTPSAVALEETQRSYAQHKEQYEKLR 291
            ||.||||:|||:|::||||:|||:||||.|||  |..|....:...:|::|:.:..|||:|:|:|
 Frog   268 TLVNKTIEDTLITVKQYETSRIEYDAYRTDLEELNMGPRDAITLPKIEQSQQLFHSHKEKYDKMR 332

  Fly   292 SDVAVKMQFLDENRIKVMHKQLILLHNAIAAYFSGNAMALESTLKQFNIKLKSPNAVTGSWLEQ 355
            :||:||::||:||::||:|.||:|.||||||||:||...|:.|||||::|||:|.....||||:
 Frog   333 NDVSVKLKFLEENKVKVLHNQLVLFHNAIAAYFAGNQKQLKETLKQFHVKLKTPGVDAPSWLEE 396

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ArfipNP_650058.1 BAR_Arfaptin 140..338 CDD:153344 108/199 (54%)
arfip1XP_012816839.2 BAR_Arfaptin 179..379 CDD:153344 108/199 (54%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 252 1.000 Domainoid score I2047
eggNOG 00.000 Not matched by this tool.
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 291 1.000 Inparanoid score I2739
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1179170at2759
OrthoFinder 1 1.000 - - FOG0003325
OrthoInspector 1 1.000 - - oto105081
Panther 1 1.100 - - O PTHR12141
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X2693
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
99.070

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