DRSC/TRiP Functional Genomics Resources

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Protein Alignment Arfip and arfip2a

DIOPT Version :10

Sequence 1:NP_650058.1 Gene:Arfip / 41353 FlyBaseID:FBgn0037884 Length:355 Species:Drosophila melanogaster
Sequence 2:XP_005157415.1 Gene:arfip2a / 449664 ZFINID:ZDB-GENE-041010-221 Length:410 Species:Danio rerio


Alignment Length:383 Identity:167/383 - (43%)
Similarity:230/383 - (60%) Gaps:61/383 - (15%)


- Green bases have known domain annotations that are detailed below.


  Fly     8 IHEMLKDAPSLNDSCGAVHTGTEGGSGILGSASSHSIAGGGGGGGNVGV----GVGGPF------ 62
            :.:::...|:||::                     ||..||.||...|:    .:.||.      
Zfish    53 LQQVMVSGPNLNET---------------------SIVSGGYGGAAEGIIPTSSIKGPAIRFNPE 96

  Fly    63 -------GAPSSLPLRNHSAPTTPM---------SPSSPP-------SGNGILSPTDSGSGSIIR 104
                   .||.. .:|:.|...||.         .|.:.|       :.|..|...::..|    
Zfish    97 YFERRCGNAPKP-DIRSKSRGITPSQSAASRIANQPGNYPAPGMHHSNSNPSLMSEEATKG---- 156

  Fly   105 TSASKIDSLKNWSISTYKCTRQIMLEKLGKSQRTVDSELEAQIEQLRETQRKYLSILRLTRAFSS 169
            .:..|.|::|.|||:|||||:|:..|:.|:..:|||.||||||:.||||:.||..||||.|..::
Zfish   157 VAVEKFDTVKKWSINTYKCTKQMFSERFGRGTKTVDLELEAQIDVLRETKLKYERILRLARELTN 221

  Fly   170 HFQHVVVTQHALADSFADLAQKNPELQKEFTCNSETQRNLTKNGELLLNALNFFISSVNTLCNKT 234
            ||.::|.||.||.|:||||:||:||||.||..|:||||.|.||||.||.|:|||:||:|||.|||
Zfish   222 HFYNMVQTQQALGDTFADLSQKSPELQDEFGYNAETQRLLCKNGETLLGAINFFVSSINTLVNKT 286

  Fly   235 IDDTLLTIRQYETARIEFDAYRMDLE--NTKPELTPSAVALEETQRSYAQHKEQYEKLRSDVAVK 297
            ::|||:||:.||.||:||||||.|||  :..|....:.:.:|..|:.|...|::||:|.|||.:|
Zfish   287 MEDTLMTIKTYENARLEFDAYRSDLEELSAGPRDAATMMRIEIAQQQYQIQKDKYERLHSDVTIK 351

  Fly   298 MQFLDENRIKVMHKQLILLHNAIAAYFSGNAMALESTLKQFNIKLKSPNAVTGSWLEQ 355
            ::||:||::|||||||:|.||||:|||:||...||.||:|||:|||.|.:...||||:
Zfish   352 LKFLEENKVKVMHKQLLLFHNAISAYFAGNQQQLEQTLRQFNVKLKPPGSDKPSWLEE 409

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ArfipNP_650058.1 BAR_Arfaptin 140..338 CDD:153344 117/199 (59%)
arfip2aXP_005157415.1 BAR_Arfaptin 192..392 CDD:153344 117/199 (59%)

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