DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Arfip and Arfip2

DIOPT Version :9

Sequence 1:NP_650058.1 Gene:Arfip / 41353 FlyBaseID:FBgn0037884 Length:355 Species:Drosophila melanogaster
Sequence 2:NP_001004222.1 Gene:Arfip2 / 293344 RGDID:1303204 Length:341 Species:Rattus norvegicus


Alignment Length:355 Identity:163/355 - (45%)
Similarity:224/355 - (63%) Gaps:50/355 - (14%)


- Green bases have known domain annotations that are detailed below.


  Fly     5 ERSIHEMLKDAPSLNDSCGAVHTGTEGGSGILGSASSHSIAGGGGGGGNVGVGVGGPFGAPSSLP 69
            |:.:.:::...|:||::                     ||..||.||...|:           :|
  Rat    32 EQDLQQVMVSGPNLNET---------------------SIVSGGYGGSGDGL-----------IP 64

  Fly    70 LRNHSAPTTPMSPSSPPS--GNGILSPTDSGSGSIIRTSASKIDSLKNWSISTYKCTRQIMLEKL 132
            ..:...|:...|||.|..  ..||              :..|.|.:|.|.|:|||||:|::.|:.
  Rat    65 TGSGRHPSHSTSPSGPGDEVARGI--------------AGEKFDIVKKWGINTYKCTKQLLSERF 115

  Fly   133 GKSQRTVDSELEAQIEQLRETQRKYLSILRLTRAFSSHFQHVVVTQHALADSFADLAQKNPELQK 197
            |:..||||.|||.|||.||||:|||.|:|:|.||.::|...::.|||||.|:||||:||:||||:
  Rat   116 GRGSRTVDLELELQIELLRETKRKYESVLQLGRALTAHLYSLLQTQHALGDAFADLSQKSPELQE 180

  Fly   198 EFTCNSETQRNLTKNGELLLNALNFFISSVNTLCNKTIDDTLLTIRQYETARIEFDAYRMDLENT 262
            ||..|:|||:.|.||||.||.|:|||:||:|||..||::|||:|::|||.||:|:||||.|||..
  Rat   181 EFGYNAETQKLLCKNGETLLGAVNFFVSSINTLVTKTMEDTLMTVKQYEAARLEYDAYRTDLEEL 245

  Fly   263 K--PELTPSAVALEETQRSYAQHKEQYEKLRSDVAVKMQFLDENRIKVMHKQLILLHNAIAAYFS 325
            .  |....:...||..|.::..|:::|||||.|||:|::||:||:||||||||:|.|||::|||:
  Rat   246 SLGPRDAGTRGRLESAQATFQTHRDKYEKLRGDVAIKLKFLEENKIKVMHKQLLLFHNAVSAYFA 310

  Fly   326 GNAMALESTLKQFNIKLKSPNAVTGSWLEQ 355
            ||...||.||:||||||:.|.|...||||:
  Rat   311 GNQKQLEQTLQQFNIKLRPPGAEKPSWLEE 340

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ArfipNP_650058.1 BAR_Arfaptin 140..338 CDD:153344 116/199 (58%)
Arfip2NP_001004222.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 46..84 14/69 (20%)
BAR_Arfaptin 136..323 CDD:153344 106/186 (57%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C166335314
Domainoid 1 1.000 267 1.000 Domainoid score I1799
eggNOG 00.000 Not matched by this tool.
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H8234
Inparanoid 1 1.050 305 1.000 Inparanoid score I2558
OMA 1 1.010 - - QHG48818
OrthoDB 1 1.010 - - D1179170at2759
OrthoFinder 1 1.000 - - FOG0003325
OrthoInspector 1 1.000 - - otm46197
orthoMCL 1 0.900 - - OOG6_105484
Panther 1 1.100 - - LDO PTHR12141
Phylome 1 0.910 - -
SonicParanoid 1 1.000 - - X2693
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
1413.910

Return to query results.
Submit another query.