DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Arfip and arfip2

DIOPT Version :10

Sequence 1:NP_650058.1 Gene:Arfip / 41353 FlyBaseID:FBgn0037884 Length:355 Species:Drosophila melanogaster
Sequence 2:XP_031753315.1 Gene:arfip2 / 100380075 XenbaseID:XB-GENE-997831 Length:368 Species:Xenopus tropicalis


Alignment Length:369 Identity:158/369 - (42%)
Similarity:225/369 - (60%) Gaps:54/369 - (14%)


- Green bases have known domain annotations that are detailed below.


  Fly     5 ERSIHEMLKDAPSLNDSCGAVHTGTEGGSGILGSASSHSIAGGGGGGGNVGVGVGGPFGAPSSLP 69
            |:.:.:::...|:||::                     ||..||.||...|:           :|
 Frog    35 EQDLQQVMVSGPNLNET---------------------SIVSGGYGGTAEGI-----------IP 67

  Fly    70 LRNHSAPTTPMSPS----SPP------------SGNGILSPTDSGSGSIIRTSASKIDSLKNWSI 118
            ......|....:|:    .||            |.:..|:..:...|    .:..|.|.:|.|.|
 Frog    68 TGTIKGPAVQFNPNYIGVRPPHAQTQGGMSQQCSSHNALTSEELSRG----LAVEKFDLVKKWGI 128

  Fly   119 STYKCTRQIMLEKLGKSQRTVDSELEAQIEQLRETQRKYLSILRLTRAFSSHFQHVVVTQHALAD 183
            :|||||:|::.|:.|:..||||.|||.|||.||:|:|||..:|:|.||.::||..:|.||.||.|
 Frog   129 NTYKCTKQMISERFGRGTRTVDLELETQIELLRDTKRKYEGVLQLARALTAHFYSLVQTQRALGD 193

  Fly   184 SFADLAQKNPELQKEFTCNSETQRNLTKNGELLLNALNFFISSVNTLCNKTIDDTLLTIRQYETA 248
            :|:||:||:||||:||..|:|||:.|.||||.||.|:|||:||:|||.|||::|||:|::|||||
 Frog   194 AFSDLSQKSPELQEEFGYNAETQKLLCKNGETLLGAVNFFVSSINTLINKTMEDTLMTVKQYETA 258

  Fly   249 RIEFDAYRMDLENTK--PELTPSAVALEETQRSYAQHKEQYEKLRSDVAVKMQFLDENRIKVMHK 311
            |:||||||.|||...  |....:...:|..|:::..|:.:|||||.||.:|::||.||::|||.|
 Frog   259 RLEFDAYRADLEELSLGPRDAATLCRMETAQQNFQSHRVKYEKLRGDVTIKLRFLQENKVKVMRK 323

  Fly   312 QLILLHNAIAAYFSGNAMALESTLKQFNIKLKSPNAVTGSWLEQ 355
            ||:|.||||::||:||...||::|:||||||.|..:...||||:
 Frog   324 QLLLFHNAISSYFAGNQQQLEASLQQFNIKLSSRGSDKPSWLEE 367

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ArfipNP_650058.1 BAR_Arfaptin 140..338 CDD:153344 112/199 (56%)
arfip2XP_031753315.1 BAR_Arfaptin 150..350 CDD:153344 112/199 (56%)

Return to query results.
Submit another query.