DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG17187 and HLJ1

DIOPT Version :9

Sequence 1:NP_650056.1 Gene:CG17187 / 41351 FlyBaseID:FBgn0037882 Length:299 Species:Drosophila melanogaster
Sequence 2:NP_013884.1 Gene:HLJ1 / 855196 SGDID:S000004771 Length:224 Species:Saccharomyces cerevisiae


Alignment Length:75 Identity:29/75 - (38%)
Similarity:51/75 - (68%) Gaps:1/75 - (1%)


- Green bases have known domain annotations that are detailed below.


  Fly    12 YDLLGISLESDQNEIRKAYRKKALECHPDKNPDNPKAVERFHELSKALEILTDESARAAYDKVLK 76
            |::|.:..::..:||:|||||.|::.||||| .:|||.|.|..:::|.|:|::|..|:.||::.:
Yeast    23 YEILKVDRKATDSEIKKAYRKLAIKLHPDKN-SHPKAGEAFKVINRAFEVLSNEEKRSIYDRIGR 86

  Fly    77 AKKAAELRSR 86
            .....::.||
Yeast    87 DPDDRQMPSR 96

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG17187NP_650056.1 DnaJ 10..72 CDD:278647 25/59 (42%)
RRM_DNAJC17 175..247 CDD:240875
HLJ1NP_013884.1 DnaJ_bact 22..>154 CDD:274090 29/75 (39%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.910

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