DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG17187 and AT5G50115

DIOPT Version :9

Sequence 1:NP_650056.1 Gene:CG17187 / 41351 FlyBaseID:FBgn0037882 Length:299 Species:Drosophila melanogaster
Sequence 2:NP_680411.1 Gene:AT5G50115 / 835076 AraportID:AT5G50115 Length:485 Species:Arabidopsis thaliana


Alignment Length:123 Identity:27/123 - (21%)
Similarity:52/123 - (42%) Gaps:34/123 - (27%)


- Green bases have known domain annotations that are detailed below.


  Fly     3 SKKYSDVNLYDLLGISLESDQNE------------IRKAYRKKALECHPDKNPDNPKAVERF-HE 54
            |....::|.||::.:..:.|:..            .:..:|:::   :|...|  .|.:.|| |:
plant   370 STSVEEMNKYDMVEVLQDFDEERGVTVVPLVKVPGFKTVFRRRS---NPRTYP--RKELFRFSHQ 429

  Fly    55 LSKALEILTDESARAAYDKVLKAKKAA---ELRSRQLDGKRQKLKLELEERERAALHK 109
            :  |.::||.:..:.|....|:...|:   ||           ||:..||.||..::|
plant   430 V--AYQLLTSKKCKNAPTDCLELDPASLTHEL-----------LKVLTEEDERIGINK 474

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG17187NP_650056.1 DnaJ 10..72 CDD:278647 15/74 (20%)
RRM_DNAJC17 175..247 CDD:240875
AT5G50115NP_680411.1 DUF3444 266..436 CDD:288755 13/72 (18%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.910

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