DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG17187 and AT5G37380

DIOPT Version :9

Sequence 1:NP_650056.1 Gene:CG17187 / 41351 FlyBaseID:FBgn0037882 Length:299 Species:Drosophila melanogaster
Sequence 2:NP_001078673.1 Gene:AT5G37380 / 833712 AraportID:AT5G37380 Length:431 Species:Arabidopsis thaliana


Alignment Length:166 Identity:42/166 - (25%)
Similarity:70/166 - (42%) Gaps:16/166 - (9%)


- Green bases have known domain annotations that are detailed below.


  Fly     3 SKKYSDVNLYDLLGISLESDQNEIRKAYRKKALECHPDKNPDNPKAVERFHELSKALEILTDESA 67
            :|...||:.|.:|..|...|...:::.|||.||..||||| .:..|...|..:|:|.:.|:|:..
plant    59 NKVNEDVDWYGILNASPRDDDETLKRKYRKLALMLHPDKN-KSIGAEGAFKHVSEAWKFLSDKEK 122

  Fly    68 RAAYDKVLKAKKAAELRSRQLDGKRQKLKLELEERERAALHKLAKSQPYSTVAKSDEEVLHEQIE 132
            |||||           |.:.|....||:.:.....   .....||: .::|.|::.....:...:
plant   123 RAAYD-----------RRKSLHSVYQKVSVSSSNN---GFCNFAKT-TFTTNARTTTPRNNPPAQ 172

  Fly   133 RLRREGSRLLEEEQRAMQEQFRRNHAEQQKLQQQPV 168
            :......:.....|:......:.|...|:...|:||
plant   173 KTNPPAQKTNPPAQKTNPPAQKNNPPTQKNNPQKPV 208

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG17187NP_650056.1 DnaJ 10..72 CDD:278647 23/61 (38%)
RRM_DNAJC17 175..247 CDD:240875
AT5G37380NP_001078673.1 DnaJ 66..127 CDD:278647 23/61 (38%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.910

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