DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG17187 and AT3G12170

DIOPT Version :9

Sequence 1:NP_650056.1 Gene:CG17187 / 41351 FlyBaseID:FBgn0037882 Length:299 Species:Drosophila melanogaster
Sequence 2:NP_001325582.1 Gene:AT3G12170 / 820394 AraportID:AT3G12170 Length:298 Species:Arabidopsis thaliana


Alignment Length:295 Identity:74/295 - (25%)
Similarity:108/295 - (36%) Gaps:89/295 - (30%)


- Green bases have known domain annotations that are detailed below.


  Fly     7 SDVNLYDLLGISLESDQNEIRKAYRKKALECHPDKNPDNPKAVERFHELSKALEILTDESARAAY 71
            ::.|||::||:...:...||||||.|.||..|||||.|:..|.|:|.:|.|.:.||.||..||.|
plant    44 NEKNLYEVLGVEATASPQEIRKAYHKLALRLHPDKNKDDEDAKEKFQQLQKVISILGDEEKRAVY 108

  Fly    72 DKVLKAKKAAELRSRQLDGKRQKLKLELEERERAALHKLAKSQPYSTVAKSDEEVLHEQIERLRR 136
            |:. .:...|:|....:|..|...|         |::|               :|..|.||....
plant   109 DQT-GSVDDADLSGDVVDNLRDFFK---------AMYK---------------KVTEEDIEEFEA 148

  Fly   137 --EGSRLLEEEQRAMQEQFRRNHAEQQK-----LQQQPVQFDSAQHRIKMKWKAEPGQDYTQQEL 194
              .||   |.|:..:.|.:.:...:..:     |...| :.||  ||.|                
plant   149 NYRGS---ESEKNDLIELYNKFKGKMSRLFCSMLCSNP-KLDS--HRFK---------------- 191

  Fly   195 LKYLKKYGDVV--ALVVNSKRRGRAMVELATREACDMVLAYEKGDPAKPLHFEWVTPPAADKQTT 257
                    |::  |:.....:..:|..:.|...|       |...|..|.........||||   
plant   192 --------DIIDEAIAAGEVKSTKAYKKWAKEIA-------EMEPPTNPQKMRRKAAKAADK--- 238

  Fly   258 KSATTGCSASSTDYEDLVMRKLRQAEERKRLIEQM 292
                           ||.....::.:|||...:.|
plant   239 ---------------DLYAVMSQRGDERKEKFDSM 258

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG17187NP_650056.1 DnaJ 10..72 CDD:278647 31/61 (51%)
RRM_DNAJC17 175..247 CDD:240875 11/73 (15%)
AT3G12170NP_001325582.1 None


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 1 1.000 71 1.000 Domainoid score I3359
eggNOG 1 0.900 - - E1_COG2214
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
32.810

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