DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG17187 and Dnajb2

DIOPT Version :9

Sequence 1:NP_650056.1 Gene:CG17187 / 41351 FlyBaseID:FBgn0037882 Length:299 Species:Drosophila melanogaster
Sequence 2:XP_006245338.1 Gene:Dnajb2 / 689593 RGDID:1591035 Length:324 Species:Rattus norvegicus


Alignment Length:137 Identity:42/137 - (30%)
Similarity:67/137 - (48%) Gaps:15/137 - (10%)


- Green bases have known domain annotations that are detailed below.


  Fly    12 YDLLGISLESDQNEIRKAYRKKALECHPDKNPDNPK-AVERFHELSKALEILTDESARAAYDKV- 74
            |::|.:...:..::|:||||||||:.||||||||.: |.::|.|:::|.|:|:|:..|..||:. 
  Rat     5 YEILDVPRSASPDDIKKAYRKKALQWHPDKNPDNKEFAEKKFKEVAEAYEVLSDKHKREIYDRYG 69

  Fly    75 ---LKAKKAAELRSRQLDGKRQKLKLELEERERAALHKLAKSQPYSTVAKSDEEVLHE--QIERL 134
               |....:...|| :..|............|...........|:|       |:..:  ....|
  Rat    70 REGLTGAGSGPSRS-ETGGMEPGFTFTFRSPEEVFREFFGSGDPFS-------ELFDDLGAFSEL 126

  Fly   135 RREGSRL 141
            :.:||||
  Rat   127 QNQGSRL 133

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG17187NP_650056.1 DnaJ 10..72 CDD:278647 27/60 (45%)
RRM_DNAJC17 175..247 CDD:240875
Dnajb2XP_006245338.1 DnaJ 3..>110 CDD:223560 34/105 (32%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
21.910

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