DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG17187 and Dnajb4

DIOPT Version :9

Sequence 1:NP_650056.1 Gene:CG17187 / 41351 FlyBaseID:FBgn0037882 Length:299 Species:Drosophila melanogaster
Sequence 2:NP_001013094.1 Gene:Dnajb4 / 295549 RGDID:1305826 Length:337 Species:Rattus norvegicus


Alignment Length:291 Identity:62/291 - (21%)
Similarity:105/291 - (36%) Gaps:111/291 - (38%)


- Green bases have known domain annotations that are detailed below.


  Fly    12 YDLLGISLESDQNEIRKAYRKKALECHPDKNPDNPKAVERFHELSKALEILTDESARAAYDKV-- 74
            |.:|||...:...:|:|||||:||:.||||| .:|:|.|:|.|:::|.|:|:|...|..||:.  
  Rat     6 YHILGIEKGATDEDIKKAYRKQALKFHPDKN-KSPQAEEKFKEVAEAYEVLSDPKKREIYDQFGE 69

  Fly    75 --LK-------------------------------AKKAAELRSRQLDGKRQKLKLELEERERAA 106
              ||                               |........|::.|.|...::|::      
  Rat    70 EGLKGGAGGTDGQGGTFRYTFHGDPHATFAAFFGGANPFEIFFGRRMGGGRDSEEMEID------ 128

  Fly   107 LHKLAKSQPYSTVA------------------KSDEEVLHEQIERLRREGSRLLEEEQRAMQEQF 153
                  ..|:|...                  |.|..::|                |.:...|:.
  Rat   129 ------GDPFSAFGFSMNGYPRDRNSVGPSRLKQDPPIIH----------------ELKVSLEEI 171

  Fly   154 RRNHAEQQKLQQQPVQFDSAQHR---------IKMKWK-----AEPGQ-DYTQQELLKYLKKYGD 203
            .....::.|:.::.:..|...:|         ||..||     ..|.: |.|...:      ..|
  Rat   172 YSGCTKRMKISRKRLNPDGRSYRSEDKILTIEIKKGWKEGTKITFPREGDETPNSI------PAD 230

  Fly   204 VVALVVNS-----KRRGRAMV---ELATREA 226
            :|.::.:.     ||.|..:|   :::.|||
  Rat   231 IVFIIKDKEHPKFKRDGSNIVYTAKISLREA 261

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG17187NP_650056.1 DnaJ 10..72 CDD:278647 27/59 (46%)
RRM_DNAJC17 175..247 CDD:240875 17/75 (23%)
Dnajb4NP_001013094.1 DnaJ 1..332 CDD:223560 62/291 (21%)
DnaJ 4..65 CDD:278647 27/59 (46%)
DnaJ_C 158..320 CDD:199909 22/126 (17%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
21.910

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